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Protein Overview: YCBB_ECOLI

General Information:
Name(s) found: YCBB_ECOLI [Swiss-Prot]
Description(s) found:
Found 7 descriptions.
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  • Hypothetical protein ycbB - Escherichia coli [Swiss-Prot]
    • Organism: Escherichia coli
    Length: 615 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLNMMCGRQ LSAISLCLAV TFAPLFNAQA DEPEVIPGDS PVAVSEQGEA LPQAQATAIM  60
   61 AGIQPLPEGA AEKARTQIES QLPAGYKPVY LNQLQLLYAA RDMQPMWENR DAVKAFQQQL 120
  121 AEVAIAGFQP QFNKWVELLT DPGVNGMARD VVLSDAMMGY LHFIANIPVK GTRWLYSSKP 180
  181 YALATPPLSV INQWQLALDK GQLPTFVAGL APQHPQYAAM HESLLALLCD TKPWPQLTGK 240
  241 ATLRPGQWSN DVPALREILQ RTGMLDGGPK ITLPGDDTPT DAVVSPSAVT VETAETKPMD 300
  301 KQTTSRSKPA PAVRAAYDNE LVEAVKRFQA WQGLGADGAI GPATRDWLNV TPAQRAGVLA 360
  361 LNIQRLRLLP TELSTGIMVN IPAYSLVYYQ NGNQVLDSRV IVGRPDRKTP MMSSALNNVV 420
  421 VNPPWNVPPT LARKDILPKV RNDPGYLESH GYTVMRGWNS REAIDPWQVD WSTITASNLP 480
  481 FRFQQAPGPR NSLGRYKFNM PSSEAIYLHD TPNHNLFKRD TRALSSGCVR VNKASDLANM 540
  541 LLQDAGWNDK RISDALKQGD TRYVNIRQSI PVNLYYLTAF VGADGRTQYR TDIYNYDLPA 600
  601 RSSSQIVSKA EQLIR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..61] MSA 1.078988 View MSA. No confident structure predictions are available.
    2 View Details [62..232] MSA 1.145984 View MSA. No confident structure predictions are available.
    3 View Details [233..474] PSI-BLAST 5.09691 No description for 1zatA was found.
    4 View Details [475..615] PSI-BLAST 13.69897 Crystal Structure of the B. subtilis YkuD protein at 2 A resolution

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3 No functions predicted.
    4
    Term Confidence Notes
  • binding
    		•  0.877949200621699 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
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