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Protein Overview: YBDO_ECOLI

General Information:
Name(s) found: YBDO_ECOLI [Swiss-Prot]
Description(s) found:
Found 9 descriptions.
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  • Putative HTH-type transcriptional regulator ybdO - Escherichia coli [Swiss-Prot]
    • Organism: Escherichia coli
    Length: 300 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANLYDLKKF DLNLLVIFEC IYQHLSISKA AESLYITPSA VSQSLQRLRA QFNDPLFIRS  60
   61 GKGIAPTTTG LNLHHHLEKN LRGLEQTINI VNKSELKKNF IIYGPQLISC SNNSMLIRCL 120
  121 RQDSSVEIEC HDILMSAENA EELLVHRKAD LVITQMPVIS RSVICMPLHT IRNTLICSNR 180
  181 HPRITDNSTY EQIMAEEFTQ LISKSAGVDD IQMEIDERFM NRKISFRGSS LLTIINSIAV 240
  241 TDLLGIVPYE LYNSYRDFLN LKEIKLEHPL PSIKLYISYN KSSLNNLVFS RFIDRLNESF 300
  301

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..300] PSI-BLAST 50.39794 No description for 2h99A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.67

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle