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Protein Overview: UPPS_ECOLI

General Information:
Name(s) found: UPPS_ECOLI [Swiss-Prot]
Description(s) found:
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  • pir||F64741 undecaprenyl pyrophosphate synthetase [similarity] - Escherichia coli (strain K-12) [NCBI NR]
  • gi|62738379|pdb|1X07|A Chain A, Crystal Structure Of Undecaprenyl Pyrophosphate Synthase In Complex With Mg And Ipp [NCBI NR]
  • gi|62738378|pdb|1X06|A Chain A, Crystal Structure Of Undecaprenyl Pyrophosphate Synthase In Complex With Mg, Ipp And Fspp [NCBI NR]
  • gi|42560512|sp|P60472.1|UPPS_ECOLI RecName: Full=Undecaprenyl pyrophosphate synthetase; Short=UPP synthetase; AltName: Full=Di-trans,poly-cis-decaprenylcistransferase; AltName: Full=Undecaprenyl diphosphate synthase; Short=UDS [NCBI NR]
  • gi|42543897|pdb|1V7U|B Chain B, Crystal Structure Of Undecaprenyl Pyrophosphate Synthase With Farnesyl Pyrophosphate [NCBI NR]
  • gi|42543896|pdb|1V7U|A Chain A, Crystal Structure Of Undecaprenyl Pyrophosphate Synthase With Farnesyl Pyrophosphate [NCBI NR]
  • gi|34810686|pdb|1UEH|B Chain B, E. Coli Undecaprenyl Pyrophosphate Synthase In Complex With Triton X-100, Magnesium And Sulfate [NCBI NR]
  • gi|34810685|pdb|1UEH|A Chain A, E. Coli Undecaprenyl Pyrophosphate Synthase In Complex With Triton X-100, Magnesium And Sulfate [NCBI NR]
  • pir||H85501 undecaprenyl pyrophosphate synthetase [similarity] - Escherichia coli (strain O157:H7, substrain EDL933) [NCBI NR]
  • pir||H90650 undecaprenyl pyrophosphate synthetase [imported] - Escherichia coli (strain O157:H7, substrain RIMD 0509952) [NCBI NR]
  • gi|209745812|gb|ACI71213.1| undecaprenyl pyrophosphate synthetase [Escherichia coli] [NCBI NR]
  • gi|209745810|gb|ACI71212.1| undecaprenyl pyrophosphate synthetase [Escherichia coli] [NCBI NR]
  • gi|209745808|gb|ACI71211.1| undecaprenyl pyrophosphate synthetase [Escherichia coli] [NCBI NR]
  • gi|209745806|gb|ACI71210.1| undecaprenyl pyrophosphate synthetase [Escherichia coli] [NCBI NR]
  • gi|209745804|gb|ACI71209.1| undecaprenyl pyrophosphate synthetase [Escherichia coli] [NCBI NR]
  • gi|149241408|pdb|2E9D|B Chain B, E. Coli Undecaprenyl Pyrophosphate Synthase In Complex With Bph-676 [NCBI NR]
  • gi|149241407|pdb|2E9D|A Chain A, E. Coli Undecaprenyl Pyrophosphate Synthase In Complex With Bph-676 [NCBI NR]
  • gi|149241404|pdb|2E9C|B Chain B, E. Coli Undecaprenyl Pyrophosphate Synthase In Complex With Bph-675 [NCBI NR]
  • gi|149241403|pdb|2E9C|A Chain A, E. Coli Undecaprenyl Pyrophosphate Synthase In Complex With Bph-675 [NCBI NR]
  • gi|149241400|pdb|2E9A|B Chain B, E. Coli Undecaprenyl Pyrophosphate Synthase In Complex With Bph-628 [NCBI NR]
  • gi|149241399|pdb|2E9A|A Chain A, E. Coli Undecaprenyl Pyrophosphate Synthase In Complex With Bph-628 [NCBI NR]
  • gi|149241396|pdb|2E99|B Chain B, E. Coli Undecaprenyl Pyrophosphate Synthase In Complex With Bph-608 [NCBI NR]
  • gi|149241395|pdb|2E99|A Chain A, E. Coli Undecaprenyl Pyrophosphate Synthase In Complex With Bph-608 [NCBI NR]
  • gi|149241391|pdb|2E98|B Chain B, E. Coli Undecaprenyl Pyrophosphate Synthase In Complex With Bph-629 [NCBI NR]
  • gi|149241390|pdb|2E98|A Chain A, E. Coli Undecaprenyl Pyrophosphate Synthase In Complex With Bph-629 [NCBI NR]
  • Undecaprenyl pyrophosphate synthetase (EC 2.5.1.31) (UPP synthetase) (Di-trans,poly-cis-decaprenylcistransferase) (Undecaprenyl diphosphate synthase) (UDS) - Escherichia coli [Swiss-Prot]
  • undecaprenyl pyrophosphate synthetase (di-trans,poly-cis-decaprenylcistransferase) [Escherichia coli K12]gi|15829430|ref|NP_308203.1| undecaprenyl pyrophosphate synthetase [Escherichia coli O157:H7]gi|30061731|ref|NP_835902.1| hypothetical protein S0167 [nrdb_11152004_Chlamydomonas]
  • Undecaprenyl pyrophosphate synthetase (UPP synthetase) (Di-trans,poly-cis-decaprenylcistransferase) (Undecaprenyl diphosphate synthase) (UDS) [NCBI-RefSeq_human_na_08-09-2006_reversed.fasta]
  • Chain A, Crystal Structure Of Undecaprenyl Pyrophosphate Synthase In Complex With Mg, Ipp And Fspp [nr-271106-contam.fasta]
  • Chain B, Crystal Structure Of Undecaprenyl Pyrophosphate Synthase With Farnesyl Pyrophosphate [nr-271106-contam.fasta]
  • Chain B, E. Coli Undecaprenyl Pyrophosphate Synthase In Complex With Triton X-100, Magnesium And Sulfate [nr-271106-contam.fasta]
  • Chain A, Crystal Structure Of Undecaprenyl Pyrophosphate Synthase In Complex With Mg And Ipp [nr-271106-contam.fasta]
  • Chain A, E. Coli Undecaprenyl Pyrophosphate Synthase In Complex With Triton X-100, Magnesium And Sulfate [nr-271106-contam.fasta]
  • Chain A, Crystal Structure Of Undecaprenyl Pyrophosphate Synthase With Farnesyl Pyrophosphate [nr-271106-contam.fasta]
  • Undecaprenyl pyrophosphate synthase OS=Escherichia coli (strain K12) GN=uppS PE=1 SV=1 [uniprot-Ecoli-reviewed-110511.fasta]
  • Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) OS=Escherichia coli (strain K12) GN=ispU PE=1 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Escherichia coli
    Length: 253 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMLSATQPLS EKLPAHGCRH VAIIMDGNGR WAKKQGKIRA FGHKAGAKSV RRAVSFAANN  60
   61 GIEALTLYAF SSENWNRPAQ EVSALMELFV WALDSEVKSL HRHNVRLRII GDTSRFNSRL 120
  121 QERIRKSEAL TAGNTGLTLN IAANYGGRWD IVQGVRQLAE KVQQGNLQPD QIDEEMLNQH 180
  181 VCMHELAPVD LVIRTGGEHR ISNFLLWQIA YAELYFTDVL WPDFDEQDFE GALNAFANRE 240
  241 RRFGGTEPGD ETA

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Noble WS, et al. (2009) Manuscript in preparation. UPPS_ECOLI gi|134105085, gi... gi|189095939, gi...

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..253] PSI-BLAST 97.09691 Undecaprenyl diphosphate synthase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • prenyltransferase activity
    		•  4.40397054534951 bayes_pls_golite062009
  • di-trans,poly-cis-decaprenylcistransferase activity
    		•  3.07573514495519 bayes_pls_golite062009
  • transferase activity
    		•  1.42376896518855 bayes_pls_golite062009
  • catalytic activity
    		•  0.878978773660153 bayes_pls_golite062009
  • dehydrodolichyl diphosphate synthase activity
    		•  0.761527128946352 bayes_pls_golite062009
  • binding
    		•  0.747530931796963 bayes_pls_golite062009
  • protein binding
    		•  0.746384987072271 bayes_pls_golite062009
  • transferase activity, transferring alkyl or aryl (other than methyl) groups
    		•  0.256467886977999 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle