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Protein Overview: SEC8_ARATH

General Information:
Name(s) found: SEC8_ARATH [Swiss-Prot]
Description(s) found:
Found 13 descriptions.
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  • Exocyst complex component SEC8 OS=Arabidopsis thaliana GN=SEC8 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 1053 amino acids

    Gene Ontology:
    Cellular Component: cytosol [IDA]
    plasma membrane [IDA]
    exocyst [IDA]
    Biological Process: pollen tube growth [IGI]
    pollen germination [IGI]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGIFNGLPVP SDKTYLREEL ARIDESWAAA RFDSLPHVVH ILTSKDREAD IHILKEQSDV  60
   61 VEEVVDEVVH AYHGGFNKAI QNYSQILRLF SESTEKIGDL KHDLAEAKQS LGARNKQLHQ 120
  121 LWYRSVTLRH IISLLDQIEG IAKVPSRIEK LIADKQFYAA IQVYLQSSLM LEREGLQTVG 180
  181 ALQDVRSELT KLRGALFFKI LDDLHAHLYN RGEYSSVASS IYERDDEVPT TTAVAASRMS 240
  241 SQPLSRRTRT LKGDSQFGVR GLTNGSYRTA SNDESSSFDG HDEEDSVEHD ESTADTARNG 300
  301 TDSKLLSHQL PPWLSDSTPD EFIEAVRKSD DPLHVKYLQT LVQCLCMLGK VAAAGAIICQ 360
  361 KLRPTIHEII ISKIKAHLET TNLSKSACSQ GDRSVAAGLH LIKGQSEAYR LSKEKPQNGI 420
  421 SNSGTHLAVS PVSPLMAPGG KAQAAAKELL DSILDTIVKI FENHVVIGEL LEMKASQHDI 480
  481 NTPRSLPTDV NWNTESEASQ ATGGYTISFP LTVLQSECQQ LICEILRATP EAASADAAAQ 540
  541 TAKLAKKAPK KDKRDAPEDG LTFTFRFTDA TVSISNQGAD LIRQGWGKRA PNASLEGYGS 600
  601 AAVLPEQGIY LAASIYRPVL QFTDKITSML PKKHSQLVND GLLTFTENFV KDHLLPTMFV 660
  661 DYRKGVQQAI SSAAAFRPRA HTTTYTATVE KGRPILQGLL AIDLLAKEVL GWAQAMPKFA 720
  721 TDLVKYVQTF LERTFERCRT SYMEAVLEKL SYMLIGRHDI EKLMRLDAAS ACLPSTLGHA 780
  781 VSHSEAVGTE VELSDLFLSL RPIKQDNLIR DDNKLILLAS LSDSLEYVAD SIERLGQAVP 840
  841 RVASQAEGNS RNQAASPRNL ASFADEYRKL ATDCLKVLRV EMQLETVFHL QEMTNREYLE 900
  901 DEDAEEPDDF VISLTSQITR REEGMAPFIS GEKRNYVFGG ISGIAANASI KALADMRSIN 960
  961 LFGVQQICRN TIAVEQAMAA IPYIDGETVQ QNLDRVRTYF ELLNMPFEAL LAFIAEHDQM1020
 1021 FTPTEYSNLL KVNVPGRDTP SDAQSRLLEI LSH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..247] PSI-BLAST 9.69897 No description for 2i1jA was found.
    2 View Details [248..361] deduced N/A No confident structure predictions are available.
    3 View Details [362..624] PSI-BLAST 36.0 Structure of the entire cytoplasmic portion of a sensor histidine kinase protein
    4 View Details [625..871] PSI-BLAST 14.0 PhoB; PhoB receiver domain
    5 View Details [872..1053] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

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