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Protein Overview: SNRPF

General Information:
Name(s) found: SNRPF [HGNC (HUGO)]
Description(s) found:
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  • gi|806564|emb|CAA59688.1| Sm protein F [Homo sapiens] [NCBI NR]
  • gi|61237391|sp|P62306.1|RUXF_HUMAN RecName: Full=Small nuclear ribonucleoprotein F; Short=snRNP-F; Short=Sm protein F; Short=Sm-F; Short=SmF [NCBI NR]
  • gi|4507131|ref|NP_003086.1| small nuclear ribonucleoprotein polypeptide F [Homo sapiens] [NCBI NR]
  • gi|225734071|pdb|3CW1|2 Chain 2, Crystal Structure Of Human Spliceosomal U1 Snrnp [NCBI NR]
  • gi|225734062|pdb|3CW1|1 Chain 1, Crystal Structure Of Human Spliceosomal U1 Snrnp [NCBI NR]
  • gi|225734053|pdb|3CW1|Z Chain Z, Crystal Structure Of Human Spliceosomal U1 Snrnp [NCBI NR]
  • gi|225734044|pdb|3CW1|F Chain F, Crystal Structure Of Human Spliceosomal U1 Snrnp [NCBI NR]
  • gi|189053073|dbj|BAG34695.1| unnamed protein product [Homo sapiens] [NCBI NR]
  • gi|127799057|gb|AAH63397.2| SNRPF protein [Homo sapiens] [NCBI NR]
  • gi|127796370|gb|AAH02505.3| Small nuclear ribonucleoprotein polypeptide F [Homo sapiens] [NCBI NR]
  • gi|124504583|gb|AAI28453.1| Small nuclear ribonucleoprotein polypeptide F [Homo sapiens] [NCBI NR]
  • gi|124504507|gb|AAI28454.1| Small nuclear ribonucleoprotein polypeptide F [Homo sapiens] [NCBI NR]
  • gi|119617954|gb|EAW97548.1| small nuclear ribonucleoprotein polypeptide F, isoform CRA_a [Homo sapiens] [NCBI NR]
  • pir||S55053 Sm protein F - human [NCBI NR]
  • small nuclear ribonucleoprotein polypeptide F [HGNC (HUGO)]
  • Small nuclear ribonucleoprotein F OS=Homo sapiens GN=SNRPF PE=1 SV=1 [Swiss-Prot]
  • Snrpf-prov protein [Xenopus laevis]gi|49900002|gb|AAH77006.1| MGC89662 protein [Xenopus tropicalis]gi|52346080|ref|NP_001005083.1| MGC89662 protein [Xenopus tropicalis]gi|4507131|ref|NP_003086.1| small nuclear ribonucleoprotein polypeptide F [Homo sapi [nrdb_11152004_Chlamydomonas]
  • Small nuclear ribonucleoprotein F (snRNP-F) (Sm protein F) (Sm-F) (SmF) [Yateslab_human_na_07-28-2006_reversed.fasta]
  • Tax_Id=9606 Small nuclear ribonucleoprotein F [EBI-IPI_human_3.17_05-09-2006_con_reversed.fasta]
  • (NM_003095) small nuclear ribonucleoprotein polypeptide F [Homo sapiens] [NCBI-RefSeq_human-mouse-rat_na_10-18-2006_con_reversed.fasta]
  • small nuclear ribonucleoprotein polypeptide F [Homo sapiens] [NCBI-RefSeq_Human_na_12_06_2006_con_reversed.fasta]
  • unnamed protein product [Homo sapiens] [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • SNRPF protein [Homo sapiens] [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • Small nuclear ribonucleoprotein polypeptide F [Homo sapiens] [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • small nuclear ribonucleoprotein polypeptide F, isoform CRA_a [Homo sapiens] [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • Sm protein F [Homo sapiens] [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • Tax_Id=9606 SMALL NUCLEAR RIBONUCLEOPROTEIN F [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta]
  • Tax_Id=9606 Gene_Symbol=SNRPF Small nuclear ribonucleoprotein F [human-ipi-250309-contam.fasta]
  • IPI:IPI00220528.6|SWISS-PROT:P62306|TREMBL:B2R498|ENSEMBL:ENSP00000266735|REFSEQ:NP_003086|H-INV:HIT000030947|VEGA:OTTHUMP00000168782 Tax_Id=9606 Gene_Symbol=SNRPF Small nuclear ribonucleoprotein F [ipi.HUMAN.fasta.20090807]
  • [human_BMb_040710_contam.fasta]
  • Tax_Id=9606 Gene_Symbol=SNRPF Small nuclear ribonucleoprotein F ENSG00000139343 IPI00220528 [drosphohumanreversed.fasta]
  • small nuclear ribonucleoprotein F [Homo sapiens] [NCBI-RefSeq_Human_na_04-23-2010_reversed.fasta]
  • P62306;A2VCR2;B2R498;Q15356;Q6IBQ1;Q6P4I0; RecName: Full=Small nuclear ribonucleoprotein F; AltName: Full=Sm protein F; [UniProt_Human_2010_06_06-01-2010_reversed.fasta]
  • Small nuclear ribonucleoprotein F OS=Homo sapiens GN=SNRPF [011711_HMR.fasta]
  • IPI:IPI00220528.6|SWISS-PROT:P62306|ENSEMBL:ENSP00000266735|REFSEQ:NP_003086|H-INV:HIT000030947|VEGA:OTTHUMP00000168782 Tax_Id=9606 Gene_Symbol=SNRPF Small nuclear ribonucleoprotein F [ipi.HUMAN.fasta.20100406]
  • Small nuclear ribonucleoprotein F n=27 Tax=Euteleostomi RepID=RUXF_HUMAN [UniProt_Xenopus_laevis_01-01-2011_reversed.fasta]
  • GeneSymbol=SNRPF Synonyms=SMF|Sm-F small nuclear ribonucleoprotein F [Homo sapiens] [NCBI-RefSeq_Human_Seno_07-12-2011_reversed.fasta]
  • IPI:IPI00220528.6|SWISS-PROT:P62306|ENSEMBL:ENSP00000266735|REFSEQ:NP_003086|H-INV:HIT000030947 Tax_Id=9606 Gene_Symbol=SNRPF Small nuclear ribonucleoprotein F [ipi.HUMAN.20110912.fasta]
  • Small nuclear ribonucleoprotein F GN=SNRPF [Doctor+uniprot-HUMAN-120911.fasta]
    • Organism: Homo sapiens
    Length: 86 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLPLNPKPF LNGLTGKPVM VKLKWGMEYK GYLVSVDGYM NMQLANTEEY IDGALSGHLG  60
   61 EVLIRCNNVL YIRGVEEEEE DGEMRE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..86] PSI-BLAST 16.09691 Small nuclear ribonucleoprotein F, Smf


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle