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Protein Overview: RUXE_DANRE

General Information:
Name(s) found: RUXE_DANRE [Swiss-Prot]
Description(s) found:
Found 13 descriptions.
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  • Small nuclear ribonucleoprotein E OS=Danio rerio GN=snrpe PE=3 SV=1 [Swiss-Prot]
    • Organism: Danio rerio
    Length: 92 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA]
    ribonucleoprotein complex [IEA]
    Biological Process: RNA splicing [IEA]
    mRNA processing [IEA]
    Molecular Function: RNA binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAYRGQGQKV QKVMVQPINL IFRYLQNRSR ISVWLYEQVN MRIEGCIIGF DEYMNLVLDD  60
   61 AEEVHMKTKN RKPLGRIMLK GDNITLLQSV SN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..92] PSI-BLAST 10.69897 Crystal structure of Cryptosporidium parvum U6 snRNA-associated Sm-like protein LSm5


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle