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Protein Overview: RS16_ICTPU

General Information:
Name(s) found: RS16_ICTPU [Swiss-Prot]
Description(s) found:
Found 7 descriptions.
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  • 40S ribosomal protein S16 OS=Ictalurus punctatus GN=rps16 PE=2 SV=1 [Swiss-Prot]
    • Organism: Ictalurus punctatus
    Length: 146 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPAKGPLQSV QVFGRKKTAT AVAHCKRGNG LIKVNGRPLE TIEPATLQYK LLEPVLLLGK  60
   61 ERFAGVDIRV RVKGGGHVAQ VYAIRQSISK ALVAYYQKYV DEASKKEIKD ILIQYDRTLL 120
  121 VADPRRCESK KFGGPGARAR YQKSYR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..146] PSI-BLAST 46.39794 Structure of the ribosomal 80S-eEF2-sordarin complex from yeast obtained by docking atomic models for RNA and protein components into a 11.7 A cryo-EM map. This file, 1S1H, Contains 40S subunit. The 60S Ribosomal Subunit Is In File 1S1I.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle