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Protein Overview: RNH2A_ARATH

General Information:
Name(s) found: RNH2A_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|49066054|sp|Q9SEZ6.2|RNH2A_ARATH RecName: Full=Ribonuclease H2 subunit A; Short=RNase H2 subunit A; AltName: Full=Ribonuclease HI subunit A; AltName: Full=Ribonuclease HI large subunit; Short=RNase HI large subunit [NCBI NR]
  • gi|28973385|gb|AAO64017.1| putative ribonuclease large subunit [Arabidopsis thaliana] [NCBI NR]
  • gi|26450346|dbj|BAC42289.1| putative ribonuclease large subunit [Arabidopsis thaliana] [NCBI NR]
  • gi|18400719|ref|NP_565584.1| ribonuclease HII family protein [Arabidopsis thaliana] [NCBI NR]
  • (Q9SEZ6) Probable ribonuclease HI large subunit (EC 3.1.26.4) (RNase HI large subunit) (RNase H(35)) [Swiss-Prot]
  • Ribonuclease H2 subunit A OS=Arabidopsis thaliana GN=At2g25100 PE=2 SV=2 [Swiss-Prot]
  • putative ribonuclease large subunit [Arabidopsis thaliana]gi|28973385|gb|AAO64017.1| putative ribonuclease large subunit [Arabidopsis thaliana]gi|49066054|sp|Q9SEZ6|RNHL_ARATH Probable ribonuclease HI large subunit (RNase HI large subunit) (RNase H(35)) [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Probable ribonuclease HI large subunit [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | ribonuclease HII family protein | chr2:10686846-10688733 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • Ribonuclease H2 subunit A (RNase H2 subunit A) (Ribonuclease HI subunit A) (Ribonuclease HI large subunit) (RNase HI large subunit) [nr-271106-contam.fasta]
  • RNA binding / catalytic/ ribonuclease H [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative ribonuclease large subunit [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | chr2:10679767-10681654 REVERSE LENGTH=296 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 296 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: RNA metabolic process [IEA]
    Molecular Function: nucleic acid binding [IEA]
    ribonuclease H activity [IEA]
    RNA binding [IEA]
    catalytic activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESECLTPEW ASQPCLMGID EAGRGPVLGP MVYGCMYCPI SYQSSLASLH FADSKTLKEE  60
   61 KREELYESLK LDKSLGWAVD VIDPRELSAK MLAKNKTNLN EISHNSAMGL IKRVLDMGVL 120
  121 LTEAYLDTVG DPDKYRIKLS ERFPSIKFVV SKKADSLFPI VSGASIVAKV TRDRALKEWL 180
  181 VEETGEDINR NFGSGYPGDP ETKAWLVQHK HSVFGFPSLV RFSWGTCTTH LKGEVEVAWE 240
  241 ADENEESGNG SSSKRQAKLS SFGFKTCEKR SEEIESSGKG RCKFLQARKI QQLTQF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..296] PSI-BLAST 52.0 No description for 2dfeA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle