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Protein Overview: RL27_AGRFC

General Information:
Name(s) found: RL27_AGRFC [Swiss-Prot]
Description(s) found:
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  • gi|22096069|sp|Q8UBR6.1|RL27_AGRT5 RecName: Full=50S ribosomal protein L27 [NCBI NR]
  • gi|17936659|ref|NP_533449.1| 50S ribosomal protein L27 [Agrobacterium tumefaciens str. C58] [NCBI NR]
  • gi|17741301|gb|AAL43765.1| 50S ribosomal protein L27 [Agrobacterium tumefaciens str. C58] [NCBI NR]
  • gi|15890033|ref|NP_355714.1| 50S ribosomal protein L27 [Agrobacterium tumefaciens str. C58] [NCBI NR]
  • gi|15158010|gb|AAK88499.1| 50S ribosomal protein L27 [Agrobacterium tumefaciens str. C58] [NCBI NR]
  • 50S ribosomal protein L27 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=rpmA PE=3 SV=1 [Swiss-Prot]
  • 50S ribosomal protein L27 OS=Agrobacterium fabrum (strain C58 / ATCC 33970) GN=rpmA PE=3 SV=1 [Swiss-Prot]
  • AGR_C_5052p [Agrobacterium tumefaciens str. C58]gi|17936659|ref|NP_533449.1| 50S ribosomal protein L27 [Agrobacterium tumefaciens str. C58]gi|17741301|gb|AAL43765.1| 50S ribosomal protein L27 [Agrobacterium tumefaciens str. C58]gi|15158010|gb|AAK88499. [nrdb_11152004_Chlamydomonas]
  • AGR_C_5052p [Agrobacterium tumefaciens str. C58] [nr-271106-contam.fasta]
  • 50S ribosomal protein L27 [Agrobacterium tumefaciens str. C58] [nr-271106-contam.fasta]
  • 50S ribosomal protein L27 [nr-271106-contam.fasta]
    • Organism: Agrobacterium tumefaciens str. C58
    Length: 89 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAHKKAGGSS RNGRDSESKR LGVKKFGGEA VIPGNIILRQ RGTQWHPGAN VGIGKDHTIF  60
   61 ALTAGNVNFR TKANGRVFVS VAPKAEAAE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..89] PSI-BLAST 32.09691 No description for 1vs6W was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • structural constituent of ribosome
    		•  9.93798084434094 bayes_pls_golite062009
  • structural molecule activity
    		•  9.3625249805433 bayes_pls_golite062009
  • peptidyltransferase activity
    		•  3.94173449567504 bayes_pls_golite062009
  • transferase activity, transferring amino-acyl groups
    		•  0.479709297593055 bayes_pls_golite062009
  • catalytic activity
    		•  0.161830442565647 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle