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Protein Overview: RFAH_ECOLI

General Information:
Name(s) found: RFAH_ECOLI [Swiss-Prot]
Description(s) found:
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  • gi|84027860|sp|P0AFW0.1|RFAH_ECOLI RecName: Full=Transcriptional activator rfaH [NCBI NR]
  • pir||S30732 transcription activator rfaH - Escherichia coli (strain K-12) [NCBI NR]
  • gi|41729|emb|CAA46147.1| transcriptional activator of haemolysin synthesis and secretion [Escherichia coli] [NCBI NR]
  • pir||H86071 transcription activator rfaH - Escherichia coli (strain O157:H7, substrain EDL933) [NCBI NR]
  • pir||B91225 transcription activator rfaH - Escherichia coli (strain O157:H7, substrain RIMD 0509952) [NCBI NR]
  • gi|209753006|gb|ACI74810.1| putative oxidoreductase [Escherichia coli] [NCBI NR]
  • gi|209753004|gb|ACI74809.1| putative oxidoreductase [Escherichia coli] [NCBI NR]
  • gi|209753002|gb|ACI74808.1| putative oxidoreductase [Escherichia coli] [NCBI NR]
  • gi|209753000|gb|ACI74807.1| putative oxidoreductase [Escherichia coli] [NCBI NR]
  • gi|209752998|gb|ACI74806.1| putative oxidoreductase [Escherichia coli] [NCBI NR]
  • gi|148241|gb|AAA67638.1| also called sfrB, hlyT [Escherichia coli] [NCBI NR]
  • gi|146386658|pdb|2OUG|D Chain D, Crystal Structure Of The Rfah Transcription Factor At 2.1a Resolution [NCBI NR]
  • gi|146386657|pdb|2OUG|C Chain C, Crystal Structure Of The Rfah Transcription Factor At 2.1a Resolution [NCBI NR]
  • gi|146386656|pdb|2OUG|B Chain B, Crystal Structure Of The Rfah Transcription Factor At 2.1a Resolution [NCBI NR]
  • gi|146386655|pdb|2OUG|A Chain A, Crystal Structure Of The Rfah Transcription Factor At 2.1a Resolution [NCBI NR]
  • gi|1209302|gb|AAA91060.1| RfaH [Escherichia coli] [NCBI NR]
  • Transcriptional activator rfaH - Escherichia coli [Swiss-Prot]
  • transcriptional activator affecting biosynthesis of lipopolysaccharide core, F pilin, and haemolysin; transcriptional activator affecting biosynthesis, assembly and export of lipopolysaccharide core, F pilin, and haemolysin [Escherichia coli K12]gi|15834 [nrdb_11152004_Chlamydomonas]
  • Transcriptional activator rfaH [NCBI-RefSeq_human_na_08-09-2006_reversed.fasta]
  • also called sfrB, hlyT [Escherichia coli] [NCBI-RefSeq_human_na_08-09-2006_reversed.fasta]
  • RfaH [Escherichia coli] [nr-271106-contam.fasta]
  • transcriptional activator of haemolysin synthesis and secretion [Escherichia coli] [nr-271106-contam.fasta]
  • Transcriptional activator rfaH OS=Escherichia coli (strain K12) GN=rfaH PE=1 SV=1 [uniprot-Ecoli-reviewed-110511.fasta]
  • Transcription antitermination protein RfaH OS=Escherichia coli (strain K12) GN=rfaH PE=1 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Escherichia coli
    Length: 162 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQSWYLLYCK RGQLQRAQEH LERQAVNCLA PMITLEKIVR GKRTAVSEPL FPNYLFVEFD  60
   61 PEVIHTTTIN ATRGVSHFVR FGASPAIVPS AVIHQLSVYK PKDIVDPATP YPGDKVIITE 120
  121 GAFEGFQAIF TEPDGEARSM LLLNLINKEI KHSVKNTEFR KL

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Noble WS, et al. (2009) Manuscript in preparation. RFAH_ECOLI gi|189095939, gi...

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..162] PSI-BLAST 38.69897 No description for 2ougA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle