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Protein Overview: PGP_PYRHO

General Information:
Name(s) found: PGP_PYRHO [Swiss-Prot]
Description(s) found:
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  • pir||G71015 hypothetical protein PH1421 - Pyrococcus horikoshii [NCBI NR]
  • gi|56554399|pdb|1WR8|B Chain B, Crystal Structure Of Hypothetical Protein Ph1421 From Pyrococcus Horikoshii. [NCBI NR]
  • gi|56554398|pdb|1WR8|A Chain A, Crystal Structure Of Hypothetical Protein Ph1421 From Pyrococcus Horikoshii. [NCBI NR]
  • gi|46396073|sp|O50129.1|PGP_PYRHO RecName: Full=Phosphoglycolate phosphatase; Short=PGPase; Short=PGP [NCBI NR]
  • Phosphoglycolate phosphatase OS=Pyrococcus horikoshii GN=PH1421 PE=1 SV=1 [Swiss-Prot]
  • hypothetical protein PH1421 [Pyrococcus horikoshii OT3]gi|46396073|sp|O50129|PGP_PYRHO Phosphoglycolate phosphatase (PGP)gi|7429217|pir||G71015 hypothetical protein PH1421 - Pyrococcus horikoshiigi|3257844|dbj|BAA30527.1| 231aa long hypothetical protei [nrdb_11152004_Chlamydomonas]
  • Phosphoglycolate phosphatase (PGPase) (PGP) [nr-271106-contam.fasta]
  • Phosphoglycolate phosphatase OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=PH1421 PE=1 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Pyrococcus horikoshii
    Length: 231 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIKAISIDI DGTITYPNRM IHEKALEAIR RAESLGIPIM LVTGNTVQFA EAASILIGTS  60
   61 GPVVAEDGGA ISYKKKRIFL ASMDEEWILW NEIRKRFPNA RTSYTMPDRR AGLVIMRETI 120
  121 NVETVREIIN ELNLNLVAVD SGFAIHVKKP WINKGSGIEK ASEFLGIKPK EVAHVGDGEN 180
  181 DLDAFKVVGY KVAVAQAPKI LKENADYVTK KEYGEGGAEA IYHILEKFGY L

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Noble WS, et al. (2009) Manuscript in preparation. PGP_PYRHO gi|7447797, gi|1...

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..231] PSI-BLAST 35.522879 Crystal structure of hypothetical protein PH1421 from Pyrococcus horikoshii.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.02290994020378 bayes_pls_golite062009
  • hydrolase activity
    		•  0.71914501009647 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle