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Protein Overview: NID1_RAT

General Information:
Name(s) found: NID1_RAT [Swiss-Prot]
Description(s) found:
Found 8 descriptions.
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  • Nidogen-1 (Fragment) OS=Rattus norvegicus GN=Nid1 PE=1 SV=2 [Swiss-Prot]
    • Organism: Rattus norvegicus
    Length: 324 amino acids

    Gene Ontology:
    Cellular Component: basement membrane [UNKNOWN][IEA]
    membrane [IEA]
    extracellular region [IEA]
    proteinaceous extracellular matrix [UNKNOWN]
    Biological Process: cell-matrix adhesion [UNKNOWN][IEA]
    glomerular basement membrane development [UNKNOWN][IEA]
    extracellular matrix organization [UNKNOWN]
    protein-chromophore linkage [IEA]
    cell adhesion [IEA]
    positive regulation of cell-substrate adhesion [UNKNOWN][IEA]
    bioluminescence [IEA]
    Molecular Function: extracellular matrix binding [UNKNOWN][IEA]
    protein binding [IEA]
    collagen binding [UNKNOWN]
    calcium ion binding [IEA]
    laminin-1 binding [UNKNOWN]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EFHPGTFPPS FGSVAPFLAD LDTTDGLGNV YYREDLSPFI IQMAAEYVQR GFPEVSFQPT  60
   61 SVVVVTWESM APYGGPSGSL VEEGKRNTFQ AVLASSNSSS YAIFLYPDDG LQFFTTFSKK 120
  121 DENQVPAVVG FSKGLEGFLW KSNGAYNIFA NDRESIENLA KSSNAGHQGV WVFEIGSPAT 180
  181 AKGVVPADVN LDVDDDGADY EDEDYDLQTS HLGLEDVATQ PFPSHSPRRG YPDPHNVPRT 240
  241 LAPSYEATER PHGIPTERTK SFQLPVERFP QKHPQVIDVD EVEETGVVFS YNTGSQQTCA 300
  301 NNRHQCSVHA ECRDYATGFC CRCV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle