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Protein Overview: IF3_STRAW

General Information:
Name(s) found: IF3_STRAW [Swiss-Prot]
Description(s) found:
Found 5 descriptions.
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  • Translation initiation factor IF-3 OS=Streptomyces avermitilis GN=infC PE=3 SV=1 [Swiss-Prot]
    • Organism: Streptomyces avermitilis
    Length: 241 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWCYRGGSIS TEPRINDRIR VPEVRLVGPS GEQVGIVPLA KALELAQEYD LDLVEVAASA  60
   61 RPPVCKLMDY GKFKYESAMK AREARKNQAH TVIKEMKLRP KIDPHDYDTK KGHVVRFLKQ 120
  121 GDKVKITIMF RGREQSRPEL GYRLLQRLAT DVEDLGFVES SPKQDGRNMI MVLGPHKKKT 180
  181 EAMAEAREAQ AARKAEAKAN PGRSQNAADE DIPEGELPEG EVPEAETTEA AEAPAEASTE 240
  241 A

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..81] PSI-BLAST 24.69897 TRANSLATION INITIATION FACTOR 3 N-TERMINAL DOMAIN
    2 View Details [82..241] PSI-BLAST 31.69897 TRANSLATION INITIATION FACTOR 3 C-TERMINAL DOMAIN

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • translation initiation factor activity
    		•  5.47485713101079 bayes_pls_golite062009
  • translation regulator activity
    		•  1.62528736558737 bayes_pls_golite062009
  • translation factor activity, nucleic acid binding
    		•  1.60662288414996 bayes_pls_golite062009
  • binding
    		•  1.47561914415547 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.12320467511263 bayes_pls_golite062009
    2
    Term Confidence Notes
  • translation initiation factor activity
    		•  8.09269133854598 bayes_pls_golite062009
  • translation regulator activity
    		•  4.19718241948497 bayes_pls_golite062009
  • translation factor activity, nucleic acid binding
    		•  4.18160226822061 bayes_pls_golite062009
  • nucleic acid binding
    		•  3.21583663075334 bayes_pls_golite062009
  • binding
    		•  2.86350131209009 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle