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Protein Overview: gi|151556674, gi...

General Information:
Name(s) found: gi|157169958 [NCBI NR]
gi|151556674 [NCBI NR]
Description(s) found:
Found 2 descriptions.
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  • gi|157169958|gb|AAI53121.1| Tumor necrosis factor (ligand) superfamily, member 4 [synthetic construct] [NCBI NR]
  • gi|151556674|gb|AAI48527.1| Tumor necrosis factor (ligand) superfamily, member 4 [synthetic construct] [NCBI NR]
    • Organism: synthetic construct
    Length: 198 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGEGVQPLD ENLENGSRPR FKWKKTLRLV VSGIKGAGML LCFIYVCLQL SSSPAKDPPI  60
   61 QRLRGAVTRC EDGQLFISSY KNEYQTMEVQ NNSVVIKCDG LYIIYLKGSF FQEVKIDLHF 120
  121 REDHNPISIP MLNDGRRIVF TVVASLAFKD KVYLTVNAPD TLCEHLQIND GELIVVQLTP 180
  181 GYCAPEGSYH STVNQVPL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..198] PSI-BLAST 75.221849 No description for 2hewF was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • tumor necrosis factor receptor binding
    		•  4.97032095500332 bayes_pls_golite062009
  • tumor necrosis factor receptor superfamily binding
    		•  2.83043724362524 bayes_pls_golite062009
  • receptor binding
    		•  2.30826967264465 bayes_pls_golite062009
  • protein binding
    		•  2.25413201891408 bayes_pls_golite062009
  • CD40 receptor binding
    		•  1.92939268560534 bayes_pls_golite062009
  • binding
    		•  1.55055236820725 bayes_pls_golite062009
  • cell surface binding
    		•  1.54737106887049 bayes_pls_golite062009
  • eukaryotic cell surface binding
    		•  1.02834426035531 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle