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Protein Overview: gi|151945179

General Information:
Name(s) found: gi|151945179 [NCBI NR]
Description(s) found:
  • gi|151945179|gb|EDN63430.1| mitochondrial ribosomal small subunit component [Saccharomyces cerevisiae YJM789] [NCBI NR]
    • Organism: Saccharomyces cerevisiae YJM789
    Length: 247 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLHCARRYML VRPRLLWQSG TCVARFQSSV RTPASEPSAE KGVDEWLEAI NELREEFSAK  60
   61 EYLPETSLAP PGQSKVDLLQ GSQAGSKIKP TAEQLAQWEA LKSVPIPPRK NATLDHITNM 120
  121 IMRHGKKEKA QTILSRALYL VYCQTRQDPI QALEKSLDEL APLMMTKTFN TGVAKASVIP 180
  181 VPLNKRQRNR IAWNWIVQSA NQRVSSDFAV RLGEELTAIA KGTSSAFEKR DQIHKTAIAH 240
  241 RAYIQLK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..89] deduced N/A No confident structure predictions are available.
    2 View Details [90..151] PSI-BLAST 175.190949 Ribosomal protein S7
    3 View Details [152..247] PSI-BLAST 175.190949 Ribosomal protein S7

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • structural constituent of ribosome
    		•  10.1836043075256 bayes_pls_golite062009
  • structural molecule activity
    		•  9.60531852031349 bayes_pls_golite062009
  • RNA binding
    		•  2.69930050072854 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.46100724116736 bayes_pls_golite062009
  • binding
    		•  1.32102784041703 bayes_pls_golite062009
  • protein binding
    		•  0.498656777425855 bayes_pls_golite062009
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.85

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle