Protein Overview: gi|151946533

General Information:
Name(s) found:	gi\|151946533 [NCBI NR]
Description(s) found:	gi\|151946533\|gb\|EDN64755.1\| eRF1 [Saccharomyces cerevisiae YJM789] [NCBI NR]
Organism:	Saccharomyces cerevisiae YJM789
Length:	437 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	NONE FOUND
Molecular Function:	NONE FOUND

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDNEVEKNIE IWKVKKLVQS LEKARGNGTS MISLVIPPKG QIPLYQKMLT DEYGTASNIK  60
   61 SRVNRLSVLS AITSTQQKLK LYNTLPKNGL VLYCGDIITE DGKEKKVTFD IEPYKPINTS 120
  121 LYLCDNKFHT EVLSELLQAD DKFGFIVMDG QGTLFGSVSG NTRTVLHKFT VDLPKKHGRG 180
  181 GQSALRFARL REEKRHNYVR KVAEVAVQNF ITNDKVNVKG LILAGSADFK TDLAKSELFD 240
  241 PRLACKVISI VDVSYGGENG FNQAIELSAE ALANVKYVQE KKLLEAYFDE ISQDTGKFCY 300
  301 GIDDTLKALD LGAVEKLIVF ENLETIRYTF KDAEDNEVIK FAEPEAKDKS FAIDKATGQE 360
  361 MDVVSEEPLI EWLAANYKNF GATLEFITDK SSEGAQFVTG FGGIGAMLRY KVNFEQLVDE 420
  421 SEDEYYDEDE GSDYDFI

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data

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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..10] [276..437]	PSI-BLAST	2710.0	Middle domain of eukaryotic peptide chain release factor subunit 1, ERF1; C-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1; N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1
2	View Details	[11..138]	PSI-BLAST	2710.0	Middle domain of eukaryotic peptide chain release factor subunit 1, ERF1; C-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1; N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1
3	View Details	[139..275]	PSI-BLAST	2710.0	Middle domain of eukaryotic peptide chain release factor subunit 1, ERF1; C-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1; N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1

Functions predicted (by domain):

#

Gene Ontology predictions

1

Term	Confidence	Notes
translation release factor activity	11.5102558694213	bayes_pls_golite062009
translation termination factor activity	11.4768548464911	bayes_pls_golite062009
translation release factor activity, codon specific	7.66455753522311	bayes_pls_golite062009
structural constituent of ribosome	2.97154934968642	bayes_pls_golite062009
nucleic acid binding	2.70960972397471	bayes_pls_golite062009
structural molecule activity	2.64319832043379	bayes_pls_golite062009
binding	2.24516466558786	bayes_pls_golite062009
translation regulator activity	1.83257472130927	bayes_pls_golite062009
translation factor activity, nucleic acid binding	1.81472167858216	bayes_pls_golite062009
RNA binding	1.59103459949328	bayes_pls_golite062009
mRNA binding	0.607146672130391	bayes_pls_golite062009
protein binding	0.381324299701367	bayes_pls_golite062009
catalytic activity	0.264002643439785	bayes_pls_golite062009

2

No functions predicted.

3

No functions predicted.

Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

Philius Transmembrane Prediction:

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Source: Reynolds et al. (2008)

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle