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Protein Overview: SO4568

General Information:
Name(s) found: SO4568 [shew_pnnl_plus_contams_psm.fasta]
Description(s) found:
  • formate-dependent nitrite reductase nrfD protein [shew_pnnl_plus_contams_psm.fasta]
    • Organism: Shewanella oneidensis
    Length: 313 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSALHFDTLV WHWPIAIYLF LAGASAGAMF FAVLLKHFVL KHNAYQSGFV QAACIVAPVA  60
   61 VMAGLGILVL DLTKPFDFWK ILVFYNPTSV MSMGVLILLI YQVFMFMWIG LLFRKPIDAW 120
  121 CENRFPIVLK LTALLSRFEA TITGLLVIFS LALGAYTGFL LSALPGYPML KNPVLPLLFL 180
  181 ASGLSSGAAC SLLGGVLLNA NPNAKEVHFI HKVEIPLILV EIVLIFTFFM GLVLTGGQSK 240
  241 LAAFNAIGYG FWGWIFWLGI VGIGLSGPLA MNLFMTATSK RKWAYVAGTA CLSLIGVLLL 300
  301 RNFILYTGQM TVV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..234] MSA 7.169996 View MSA. No confident structure predictions are available.
    2 View Details [235..313] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle