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Protein Overview: PDE6D_CANLF

General Information:
Name(s) found: PDE6D_CANLF [Swiss-Prot]
Description(s) found:
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  • gi|9087171|sp|Q9XT54.1|PDE6D_CANFA RecName: Full=Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta; Short=GMP-PDE delta [NCBI NR]
  • gi|5852401|gb|AAD54058.1|AF109151_1 cGMP-phosphodiesterase delta subunit [Canis familiaris] [NCBI NR]
  • gi|50978888|ref|NP_001003156.1| phosphodiesterase 6D [Canis lupus familiaris] [NCBI NR]
  • gi|5081402|gb|AAD39365.1|AF113996_1 cGMP-phosphodiesterase delta subunit [Canis familiaris] [NCBI NR]
  • gi|22096317|emb|CAD20650.2| cGMP-phosphodiesterase delta subunit [Canis familiaris] [NCBI NR]
  • gi|13641318|gb|AAK31798.1| rod cyclic GMP phosphodiesterase delta subunit [Canis familiaris] [NCBI NR]
  • Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta OS=Canis lupus familiaris GN=PDE6D PE=2 SV=1 [Swiss-Prot]
  • Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta OS=Canis familiaris GN=PDE6D PE=2 SV=1 [Swiss-Prot]
  • (Q9XT54) Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase delta-subunit (EC 3.1.4.17) (GMP-PDE delta) [Swiss-Prot]
  • cGMP-phosphodiesterase delta subunit [Canis familiaris]gi|5852401|gb|AAD54058.1| cGMP-phosphodiesterase delta subunit [Canis familiaris]gi|5081402|gb|AAD39365.1| cGMP-phosphodiesterase delta subunit [Canis familiaris]gi|13641318|gb|AAK31798.1| rod cycl [nrdb_11152004_Chlamydomonas]
  • cGMP-phosphodiesterase delta subunit [Canis familiaris] [nr-271106-contam.fasta]
  • phosphodiesterase 6D, cGMP-specific, rod, delta [Canis familiaris] [nr-271106-contam.fasta]
  • rod cyclic GMP phosphodiesterase delta subunit [Canis familiaris] [nr-271106-contam.fasta]
  • Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta (GMP-PDE delta) [nr-271106-contam.fasta]
    • Organism: Canis lupus familiaris
    Length: 150 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAKDERARE ILKGFKLNWM NLRDAETGKI LWQGTEDLSV PGVEHEARVP KKILKCKAVS  60
   61 RELNFSSAEQ MEKFRLEQKV YFKGQCLEEW FFEFGFVIPN STNTWQSLIE AAPESQMMPA 120
  121 SVLTGNVIIE TKFFDDDLLV STSRVRLFYV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..150] PSI-BLAST 63.221849 GMP-PDE delta


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle