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Protein Overview: orf19.13800, orf...

General Information:
Name(s) found: orf19.6442 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
orf19.13800 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
Description(s) found:
Found 2 descriptions.
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  • PRP8 CGDID:CAL0002209 Assembly 19, Contig19-10247 (106358, 113608) CDS, translated using codon table 12 (2416 residues)||Protein similar to <i>S. cerevisiae</i> Prp8p; transcription is repressed in response to alpha pheromone in SpiderM medium [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
  • PRP8 CGDID:CAL0002209 Assembly 19, Contig19-20247 (106341, 113591) CDS, translated using codon table 12 (2416 residues)||Protein similar to <i>S. cerevisiae</i> Prp8p; transcription is repressed in response to alpha pheromone in SpiderM medium [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
    • Organism: Candida albicans
    Length: 2416 amino acids

    Gene Ontology:
    Cellular Component: U4/U6 x U5 tri-snRNP complex [IEA]
    U5 snRNP [IEA]
    Biological Process: nuclear mRNA 3'-splice site recognition [IEA]
    assembly of spliceosomal tri-snRNP [IEA]
    Molecular Function: second spliceosomal transesterification activity [IEA]
    U5 snRNA binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRKLPPPPP PPGISNKNKR RKENDGKPIT ENSNGAGKQQ LPPPPPPPSS SQSLNSKLRP  60
   61 PPPPPPPPPP SADSKKQSAP STSLENEQEP RKRTWSNVVK SRRQKKSDTK RSATQVIPQK 120
  121 PEMPPQHLRK IMIDHGDLTS NKIASDKRSH LGSLKYLPHA LLKLLENMPQ PWEQQKEVKV 180
  181 LYHTTGAITF VNEIPRVIEP VYIAQWATTW NMMRREKKDR KHFKRMRFPP FDDEEPPLDW 240
  241 LENLDDTELV DAIRSKEIED DDELRDWFYD TRPLVEDPDI VNGDSYRKWN LDFGTMNKLY 300
  301 QLSRPILHEG QTQKFDKNSL FTAKSLNVAI PGGPKFEPLF KDKINNPELE DFTEFNSVDR 360
  361 IIFRQPIKTE YKVELPFLYN SFVKKVSVSP LGAPLDCRSQ QPQSKGLPAF TFNPKFNLIV 420
  421 PKTQPKKSED KDDDDDDNND FALDVEPFLS WTTTEETNDI EEFGEVPVEP KGTADALDLF 480
  481 FAPYPFNRRR GKTIRAQDAA LTKDWYLHQA PKSSNTKVRV SYQKLLKNYV LNEVHKRPNS 540
  541 RRRSHKNKHQ KLLRSLKMTK YFQQTTIDWV EAGIQVCRQG FNMLNLLIHK RGLTYLHLDY 600
  601 NFNLKPTKTL STKERKKSRF GNAFHLIREL LRAVKMIVDS HIQYRLGNVD AYQLADGLYY 660
  661 LFNHLGQLTG IYRYKYKVMH QIRQCKDLKH IIYQRFNKVI GKGPGCGFWQ PAWRVWLFFL 720
  721 RGIIPLLERW LGNLIARQFE GRRQNDVAKT ITKQRVDAYY DIELRAQVMH DILDMIPEGL 780
  781 KQSKSKTVLQ HLSEAWRCWK ANIPWKVPGL PKPIESIIER YIKAKADGWI SVAHYNRERI 840
  841 RKGAHVEKTV ARKNLGRLTR LWIKNEQERQ MNFGKNGPFV SPDEGVKIFQ TMVSWLESRK 900
  901 FNPIPFPPIS YKHDTKLLVL ALENLKESYS ANAKLNSAQR EELALIEQAY DNPHECLVRI 960
  961 KKFLLTQRIF KEVGLEMMDY YSHLVPTYSV DPLEKITDAY LDQYLWYEAD KRRLFPNWVK1020
 1021 PSDDEIPPLL VYKWCQGINN LHSVWNTSAG ECGVMLETSL NKFSENIDFT LLNRLLRLIM1080
 1081 DTNIADYITS KNNVSLTFKD MNHVNQYGII RGLQFASFVY QYYGLVVDLL ILGLDRALEI1140
 1141 AGPVQNPNNF LQFKDLETET ASPIRLYSRY LDKIHIFFQF DNEEASGLIQ DYLSEHPDPN1200
 1201 FENVVGYNNH RCWPRDSRMR LMRHDVNLGR ATFWEISGRI PTSLTSIEWE DSFASVYSRD1260
 1261 NPNLLFSMCG FEVRILPKIR AKELSSSQEG VWDLVDQNTR ERTAKAFLQV SQEAVDHFHN1320
 1321 RIRQILMSSG STTFTKVAAK WNTALIALVT YYREAAIATP SLLDVLVKCE TKIQNRVKMG1380
 1381 LNSKMPSRFP PAVFYTPKEL GGLGMLSASH ILIPASDLRW SKQTDTGITH FRAGMTHQDE1440
 1441 KIIPTIFRYV TSWENEFLDS QRVWAEYAIK RQEAIEQNRR LTFEDMENNW DRGLPRISTL1500
 1501 FQKDRHTLAY DKGHRIRREF KQFSLARFNP FWWTSNHHDG KLWNLNAYRT DVIQALGGIE1560
 1561 TILEHTLFKG TGFDSWEGLF WEKASGFEDS LKFKKLTNAQ RQGLSQIPNR RFTLWWSPTI1620
 1621 NRANVYVGFL VQLDLTGIFL HGKIPTLKIS LIQIFRAHLW QKIHESVVQD ICQVLDKELE1680
 1681 VLQIDNVEKQ AIHPRKSYKM NSSTADIVLT STYKWKVSKP SLLNEKDDKM EIPATTFWID1740
 1741 VQLRYGDYDS HDISRYARSK FLDYTTDGMS SYPSPTGIII AIDLAYNMYD VYGNWFPGLK1800
 1801 PLVHNAMREI MKANPALYVL RERIRKGLQL YQSQPQEAFL NSNNYAELFN NDTQLFVDDT1860
 1861 NVYRVTVHKT FEGNLATKPI NGCIFILNPK SGQLFLKIIH TSVWSGQKRL GQLAKWKAAE1920
 1921 EVAALVKSLP REEQPKQLIV SRRGMMDPLE VHMLDFPNIS IRPSELHLPF AAVMKIDKLS1980
 1981 DIVLKASEPQ MVLFNFYDDW LKSISPYTAF SRVILILRAL NIDTETANHI LRPSANIVTQ2040
 2041 DHHIWPSLSD EQWVDVEAQL RDLILSDYSK KYNVNIQSLT QSEVRDLILG QDIRAPSVKR2100
 2101 QEIAEIEDGK SNNQVENKEL TALKTTTTNV HGEEITTVTT TNYEQSTFSS RNEWRNRAIA2160
 2161 ANNLHLRAKN IYVSSEEFVD DENSFTYILP KNILQKLIQI SDLRIQVGAF LYGKSPADHV2220
 2221 GVKEIKCIAI VPQLGNVNSI QFPNTLPDQV GYLKDLELLG WVHTQSQEFS YMTSFDITTQ2280
 2281 SRFFDEYKPN FVTMTVAYTP GSVTVSSFEI TKEGFDWGRT NNDMMSETPS GFSKDYAKKN2340
 2341 QLIMSDKIAG TFMVPDDDIW NYFFMGAIFN AAELYDLKLD IPLTFYDELH RPIHFSNFTH2400
 2401 IEAGNEEEAN QEDVFS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle