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Protein Overview: orf19.13575, orf...

General Information:
Name(s) found: orf19.6195 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
orf19.13575 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
Description(s) found:
Found 2 descriptions.
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  • orf19.6195 CGDID:CAL0006149 Assembly 19, Contig19-10241 (3671, 5905) CDS, translated using codon table 12 (744 residues)||Predicted ORF in Assemblies 19 and 20 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
  • orf19.6195 CGDID:CAL0006149 Assembly 19, Contig19-20241 (3671, 5905) CDS, translated using codon table 12 (744 residues)||Predicted ORF in Assemblies 19 and 20 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
    • Organism: Candida albicans
    Length: 744 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA]
    Biological Process: generation of mature 3'-end of 5S rRNA generated by RNA polymerase III [IEA]
    U5 snRNA 3'-end processing [IEA]
    exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [IEA]
    tRNA 3'-trailer cleavage, exonucleolytic [IEA]
    Molecular Function: 3'-5'-exoribonuclease activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSEIEIELG ADDPLSKSTA RLSICQADME EETEGNQNPR LQVRELLQRE KESIQRRDSA  60
   61 VSLNSFLEED EENDQQQSQS QQQHLSPKKK SRSKKAAEKR RRSSAHSFSI AQQQPPLKRE 120
  121 KVHKRKLKKR LQPPNIELLL DKSEENSNKD SELKRFPFRN LRSLILKVFN VPGTNNLKWC 180
  181 NIENSEKIPT VCVCLVPGLQ LEENLAETAD NGLQSSKEKS KQQCAISNLK RIDQLSFIFD 240
  241 NFTNFIKSSS PGSKDSIFSS LQTLLNVPLT KNEKNSLLRK SKATKITIKD LLLTEQQLKT 300
  301 YNYPTTLVDS TWKATKDLYN TDSNNNEKSD SETRKSRIYA LDCEFCKAGA KQVLTRISLL 360
  361 DFEAKVVMDE LVKPKEEITD YVTKYSGITE ELLRDVTTTI EDIQNLFVNT VSQQDILIGH 420
  421 SLESDLNVMK IKHDNIVDTS IIYEHNRGPP SKPSLKSLAE KHLNRQIQAG EGQGLGHSSI 480
  481 EDAKACLDLV KLKIIEGKLF GVNVGEVSIF QRLSENPNYN AGGEVNPSSD TDGNNTFKSL 540
  541 LVSYGQTREY DINPDEKYDL TKINVTNDDE AVENFVKEIH SKNFAVINLR DSEFNNKWNT 600
  601 PPDYYKGDLD YNQMESYKRT NQRLEKIYQS LPDHSLLICY SQSGDPREMF KLQGVRRNFQ 660
  661 KCEKEGIVDV TKLPEEESWT FTKSEKLLEQ TSLARESLMF IKIKPSSDTG SYSINNLSTE 720
  721 TITSVTPEIS GGGGGSSSSN KDIE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle