YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: orf19.13462, orf...

General Information:
Name(s) found: orf19.6041 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
orf19.13462 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
Description(s) found:
Found 2 descriptions.
SHOW ALL
  • RPO41 CGDID:CAL0005126 Assembly 19, Contig19-10237 (88579, 92481) CDS, translated using codon table 12 (1300 residues)||Predicted ORF from Assembly 19; downregulated during core stress response [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
  • RPO41 CGDID:CAL0005126 Assembly 19, Contig19-20237 (88590, 92492) CDS, translated using codon table 12 (1300 residues)||Predicted ORF from Assembly 19; downregulated during core stress response [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
    • Organism: Candida albicans
    Length: 1300 amino acids

    Gene Ontology:
    Cellular Component: mitochondrial DNA-directed RNA polymerase complex [IEA]
    mitochondrial nucleoid [IEA]
    Biological Process: transcription from mitochondrial promoter [IEA]
    aerobic respiration [IEA]
    mitochondrial genome maintenance [IEA]
    Molecular Function: DNA-directed RNA polymerase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSAQRSLVR RITGVRLQVR MLHHTTKTST ATSQIDTTSA GDFKHSEVLS KVMSPLMSIN  60
   61 HVKEAPSLKN YHNNKITYRS YLNLNPEKYD LDEEEKIVKY YSSKNDGVEV QPYAPEIQYL 120
  121 KNILESFSEQ KYFDKIDQVL KSLSKLVNAT EFTDICNKYL ENILQDDSLS LQDLNSIIGQ 180
  181 LQDKCKFKTN TRTEAIILGK MLNDSDNAQS SISEFFGNME KQTIVEILRN MDVIGVDNLY 240
  241 KVFDCDSIDA SVIPKELQEI YQEHKSKDHD DEIAEDILKL QENKQINPLD KKSLEELLPV 300
  301 DSFGLQVIRH SLLGLKPDSE AALKFADQVE KIIEDVDDEV LNQDIMSGKI NYFEMYSKLK 360
  361 TEEQRQAFNE ALNVFNLERQ KQIEIRGIEG AKEKWKHDFE ESQKRGDLNL SKGLNAQCYK 420
  421 WLQDVLPVLE KEYKLCEALI NGNNSVIEKD DPNAKDRAMY APFILKISPD KAIIITILEL 480
  481 FKLHSTGGVV RGFRAYKAIQ SVGKAIEAEY RIGLQAKKEN KLFSQKHLSP QLQKLMRRTM 540
  541 QKGNESTPEW DDATRARIGG VLVSILMSVA KVNVRKETPQ GLIEDFHPAF YHGMQFIAGN 600
  601 RVGVIKVHTD ISNILSGTSL TESIQPQALP MLVEPKPWNS FYGGGSLYSK TPLVRVKDSP 660
  661 ETEAYLKAAN ERGNLTGVFE GLNVLGNTAW TVNKKVFNVI SHYWNSGEEF LSIPPVSEEP 720
  721 QLPQDIPGNS DPQKLLHHTT SKYQALDEYI SNKSQRCDNN YRLEIARAFI GEKLFFPHNL 780
  781 DFRGRAYPIS PHFNHLGGDL TRSLFLFWDG KELGEEGLNW LKIQLANVYG VDKESLAKRV 840
  841 EFVNENLEKV LESAADPFAT DAWWQKAEKP WQALSVCFEL AEAYKLDDPT KFVSHLPVHQ 900
  901 DGTCNGLQHY AALGGDVEGA NQVNLNPSDK PQDVYTYVAK LVETRVKADA EKGDELAIFL 960
  961 QDKIKRKVVK QTVMTNVYGV TFIGAIEQIR KQIIHLFPKD ADHHAAARYL AVQVFASIRE1020
 1021 LFENAHFIQA WLTESAKRIT KSVTLDFGES QYSEQELLST VIWTTPLGLP CVQPYRLHKK1080
 1081 KQLKTAVQDL NIVMPSNTSA VDSRKQQNGF PPNFIHSLDA THMLMTATKC AEFDLNFASV1140
 1141 HDSFWTHAAD VPQMNRIIRE QFVKLHTTNL IELLKEEFSE RYKDNYQVLP IPNNHELARK1200
 1201 VKAIKKEWAE ALNRPVQIAD ELYMERKRLQ MLESEDPEEV EVAKNMETTI SITMNYKPYE1260
 1261 FANRQVSNSF QILVPIQFPE VPSKGEFDVN LVKKSQYFFS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle