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Protein Overview: orf19.13268, orf...

General Information:
Name(s) found: orf19.5846 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
orf19.13268 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
Description(s) found:
Found 2 descriptions.
SHOW ALL
  • orf19.5846 CGDID:CAL0002355 Assembly 19, Contig19-10235 (10611, 9127) CDS, reverse complemented, translated using codon table 12 (494 residues)||Predicted ORF in Assemblies 19 and 20 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
  • orf19.5846 CGDID:CAL0002355 Assembly 19, Contig19-20235 (10612, 9128) CDS, reverse complemented, translated using codon table 12 (494 residues)||Predicted ORF in Assemblies 19 and 20 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
    • Organism: Candida albicans
    Length: 494 amino acids

    Gene Ontology:
    Cellular Component: core TFIIH complex portion of holo TFIIH complex [IEA]
    SSL2-core TFIIH complex portion of NEF3 complex [IEA]
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSHLFKATV NEYLEGLPKT VQSKLYEAPA TCLSIFRLLS PMAKFYIMSM IFNEKPIALR  60
   61 DLDKWCKPSA RKLEFEALKR LESLHLIEYD SKGSHVRLHS IFRKNFRDCL TGSQNPNAFG 120
  121 SISTTVDKHK VDIPFLDLFA SQKWETILHF MVGTESTATP SDSVLSLLKL GGLMEGPNND 180
  181 LRITNSGFQF LLQDVNAQIW TLLLQYLNLT QELNMDPVDV LNFIFVLGSL ELGKSYSVLS 240
  241 LSETQVSMLA DLKDYGLVYQ RSDTSGRFYP TRLATTLTSD SAALKTPSMA MDEEEQQVAT 300
  301 KESIIIETNF KIYAYTKSPL EIAILNLFVH FKTRFANMVC GQITRESIRN ALYNGITADQ 360
  361 IIKFLETHAH PQMRILAKEK LDKKIEFDTS HNINTAGGAP QSKTDGMVSQ HKLEILPPNV 420
  421 VDQIKLWQLE LDRIQTFDGY LFKDFSNQQE YDILSNYASE LGVLIWADKV KKKFFVTKDG 480
  481 MTQVADFANR KLKR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle