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Protein Overview: orf19.58

General Information:
Name(s) found: orf19.58 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
Description(s) found:
  • orf19.58 CGDID:CAL0000608 Assembly 19, Contig19-10020 (27020, 24660) CDS, reverse complemented, translated using codon table 12 (786 residues)||Predicted ORF in Assemblies 19 and 20 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
    • Organism: Candida albicans
    Length: 786 amino acids

    Gene Ontology:
    Cellular Component: nuclear exosome (RNase complex) [IEA]
    nucleolus [IEA]
    Biological Process: U4 snRNA 3'-end processing [IEA]
    U1 snRNA 3'-end processing [IEA]
    posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery [IEA]
    exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [IEA]
    nuclear polyadenylation-dependent mRNA catabolic process [IEA]
    nuclear polyadenylation-dependent antisense transcript catabolic process [IEA]
    polyadenylation-dependent snoRNA 3'-end processing [IEA]
    nuclear polyadenylation-dependent rRNA catabolic process [IEA]
    nuclear polyadenylation-dependent snoRNA catabolic process [IEA]
    response to drug [IMP]
    histone mRNA catabolic process [IEA]
    nuclear polyadenylation-dependent CUT catabolic process [IEA]
    nuclear polyadenylation-dependent snRNA catabolic process [IEA]
    U5 snRNA 3'-end processing [IEA]
    nuclear retention of pre-mRNA with aberrant 3'-ends at the site of transcription [IEA]
    nuclear polyadenylation-dependent tRNA catabolic process [IEA]
    Molecular Function: 3'-5'-exoribonuclease activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSESEDVFK EIFPKLMNTI RAASSLGAQD VNFYKTVDKD LGQQIDDQSQ RLLNISNDLL  60
   61 RAAIDDPNDF QAIEYGEENV TGEVSWKPVS RIIDSIFDKI DSTFVQAKRK AKGITKDQEL 120
  121 EYLDNGKTST TTTISNEKAS KIEKPQLKFK VPIDNSESGP FKPKLSSKPH ALVPFNDSLI 180
  181 NPEPVYEDSI EIIDPPFYAQ PYEYEIDNQP YPDAILAKSD AIPPKDWSTT KAIWVDTVEE 240
  241 LQKMVQELKK STEIAVDLEH HDYRSYYGIV CLMQISNREQ DWIIDTLALR DDLTVLNEVF 300
  301 ADPDIVKVFH GAFMDIIWLQ RDLGLYVVSL FDTFHASRAL GFPRFSLAYL LEVYAHFKTS 360
  361 KQYQLADWRI RPLSPPMLAY ARSDTHFLLF IYDQLKNKLI DAEKLSQVLY DSRQVAKRRF 420
  421 EYTKYRPMAN TFSNKVTCPV MAFNPKEPWG SIVSQYNVPH FKRPVVEVLY KWRDLMAKKQ 480
  481 DESVRYIMPN QLLVSLANLE SPVDLNKVLN VSYRISDAVR INAKELANLI EKTLKETEAN 540
  541 DWDLVDQWNK QQSEEQDDNS IDAASVANEF DRLLTNTTQV FETSTLLTKE SKAFGNIYHN 600
  601 KALFTLEFRD EKVFKHNFND VSKKRFEATW KELTAATDLA ITIPISDIED IDEAEEEEDE 660
  661 QSEEDASEST PQASDEAPKI SGQAALFNND KEINPNELIT LRKRNVRPNK KNNNNNKKVP 720
  721 QEDQKEIDYA NADKILLKDI KKKNDRKRRG FDPYSRDSEG PKPAKRAKAM TSGRTSTYKK 780
  781 KMNKYK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle