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Protein Overview: orf19.12756, orf...

General Information:
Name(s) found: orf19.5297 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
orf19.12756 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
Description(s) found:
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  • orf19.5297 CGDID:CAL0003682 Assembly 19, Contig19-10225 (16059, 17951) CDS, translated using codon table 12 (630 residues)||Predicted ORF in Assemblies 19 and 20 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
  • orf19.5297 CGDID:CAL0003682 Assembly 19, Contig19-20225 (16051, 17943) CDS, translated using codon table 12 (630 residues)||Predicted ORF in Assemblies 19 and 20 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
    • Organism: Candida albicans
    Length: 630 amino acids

    Gene Ontology:
    Cellular Component: core TFIIH complex portion of holo TFIIH complex [IEA]
    SSL2-core TFIIH complex portion of NEF3 complex [IEA]
    Biological Process: nucleotide-excision repair [IEA]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MILKIVFKLT SGPPNTNADG TDNGGGGGEE KSFKLTFTNR PTMNTIKDSL QTIVARSRTR  60
   61 VEGTSTPTPA PAPASTFGSA PQADSTRDST SSSTPIPPTT SGTSTSSSLL SLAASQSLSD 120
  121 ANLLKNFELQ QKLLLEDRQL RDVFTKSVMQ FKLSPQVFWS SRLNQLRTFA LTISQHKGPY 180
  181 NVLSTIKPVA TSDNQVNVNV TRDTINEIFT IYPIIKKAFD DLVPNKFNEG EFWSRFFNSK 240
  241 LFRRLRGDKI SISNSRGDVV LDKYLYIDQN YQEKLQKSST LENNGSGSGG GGGGGGSGNS 300
  301 EQGIQTLESP HVKKFLDLMG NQQDNSQKLG NRPDFTMRYD EDTNLDDDNK KPTLGNENEM 360
  361 IILMKNMNRL SSKMMSMSST NGPEKPSETT IDGLSAAELN EYEEELDLHD LNDSENLQYI 420
  421 KLNINTDIAK GTKLDSYEGS NTNNKISQDE LHKYLQSQTF QGQIELTETY TCKSEEIEKT 480
  481 SMEIAMLIKQ NFRTFKLINK ENDIAGTNIV PNSLIQEIIT YNITIVEFLS HFWKIFLHGN 540
  541 NPGQLKKIFT SLKNCQSGLI ELENKAIDQF KSMDILQKNQ KLQDKVLKDF ASCLQPMKIA 600
  601 LDKACNEYVE AVKKAKPELN ENGKRPLPEE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.90

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle