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Protein Overview: orf19.12506, orf...

General Information:
Name(s) found: orf19.5039 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
orf19.12506 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
Description(s) found:
Found 2 descriptions.
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  • orf19.5039 CGDID:CAL0001650 Assembly 19, Contig19-10217 (8745, 7753) CDS, reverse complemented, translated using codon table 12 (330 residues)||Predicted ORF in Assemblies 19 and 20 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
  • orf19.5039 CGDID:CAL0001650 Assembly 19, Contig19-20217 (8745, 7753) CDS, reverse complemented, translated using codon table 12 (330 residues)||Predicted ORF in Assemblies 19 and 20 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
    • Organism: Candida albicans
    Length: 330 amino acids

    Gene Ontology:
    Cellular Component: cytoplasmic exosome (RNase complex) [IEA]
    nuclear exosome (RNase complex) [IEA]
    Biological Process: rRNA catabolic process [IEA]
    nuclear polyadenylation-dependent tRNA catabolic process [IEA]
    exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [IEA]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGFNYIKLTY RHLLLPPTVY TYTMVQLSPA EKSYLYDSLT QQPIIRPDLR SIHQYRPLVA  60
   61 KTSFLPGSNG SARVRTEDGS ECIVSVKSKV VLISEEEEEQ QQQGHNLIEV DIDIVGHRDD 120
  121 SNYVANLKFQ LTNLLQQNFP FEVLKLTSKY TFKLYIDCII ISHSCYPLSL ISIANYLALK 180
  181 TTRLPLLISD VNDEEIAELP TFSDDWENAK LIQDYHLNAN TRKGGSSTKF QPPIFITIGV 240
  241 IGKNLILDPS FEEEQVLENG LIISFYNNKV ITPISNTNFA VNSNNSNFKG LDQSLLIQSL 300
  301 TLCNKYCPNI IRALDSLIEE DNDDNDGSIF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.88

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle