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Protein Overview: orf19.11036, orf...

General Information:
Name(s) found: orf19.3553 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
orf19.11036 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
Description(s) found:
Found 2 descriptions.
SHOW ALL
  • orf19.3553 CGDID:CAL0005924 Assembly 19, Contig19-10183 (53866, 52883) CDS, reverse complemented, translated using codon table 12 (327 residues)||Predicted ORF in Assemblies 19 and 20 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
  • orf19.3553 CGDID:CAL0005924 Assembly 19, Contig19-20183 (53984, 53001) CDS, reverse complemented, translated using codon table 12 (327 residues)||Predicted ORF in Assemblies 19 and 20 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
    • Organism: Candida albicans
    Length: 327 amino acids

    Gene Ontology:
    Cellular Component: nucleolus [IEA]
    preribosome, large subunit precursor [IEA]
    Biological Process: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [IEA]
    response to drug [IMP]
    ribosomal large subunit assembly [IEA]
    maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [IEA]
    Molecular Function: 5S rRNA binding [IEA]
    7S RNA binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIRTIKPKNA RSKRALAKKE AKLVENTKSA LFVPGSTGNK FLHDAMCDLM AFKKPFAKKF  60
   61 SKKNEIRPFE DSSQLEFFAE KNDSSLMVFS SNNKKRPKTL TFVRFFNFKV YDMIGLSIQE 120
  121 NHKLLQDFKK LTFTIGLKPM FVFNGPIFDS HPVYQHIKSL FLDFFRGEET DLQDVAGLQY 180
  181 VIALSAGEVE DLNNDKVLPL VHFRVYKLKS YKSGQKLPRI ELDEIGPRFD FKIGRRITPT 240
  241 PDVEKEATKK PKQLEAKVKK NVTTDFMGDK VAQIHVGKQD LSKLQTRKMK GLKEKYDQES 300
  301 EEEDVYVSDE EYFGEDIEEP ETKRQKV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle