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Protein Overview: orf19.3304, orf1...

General Information:
Name(s) found: orf19.3304 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
orf19.10814 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
Description(s) found:
Found 2 descriptions.
SHOW ALL
  • orf19.3304 CGDID:CAL0004045 Assembly 19, Contig19-10173 (36198, 35386) CDS, reverse complemented, translated using codon table 12 (270 residues)||Predicted ORF in Assemblies 19 and 20 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
  • orf19.3304 CGDID:CAL0004045 Assembly 19, Contig19-20173 (36200, 35388) CDS, reverse complemented, translated using codon table 12 (270 residues)||Predicted ORF in Assemblies 19 and 20 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
    • Organism: Candida albicans
    Length: 270 amino acids

    Gene Ontology:
    Cellular Component: cytoplasmic exosome (RNase complex) [IEA]
    nuclear exosome (RNase complex) [IEA]
    Biological Process: nuclear polyadenylation-dependent rRNA catabolic process [IEA]
    nuclear polyadenylation-dependent tRNA catabolic process [IEA]
    exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [IEA]
    Molecular Function: RNA binding [IEA]
    manganese ion binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDTIILPGD KLPIDEDIFT VKTTIGPGIY KKPKTQELIP SAAGILHYER AKSSSQQLIY  60
   61 IESNSKRYIP HTNDYVIGII TGAIGESYKV SLQSNSTPVL LSFWAFPNAS KKNRPNLKNG 120
  121 QAVYARVSQD IPEIETELEC IDPTSGKEGG FGVLDESGYI FDVHLNFARE LLFNPKTIFL 180
  181 ETLATRCQFE IAIGINGKIW IKCGNGVKKE ANDGSNNNQD QGEDQEMIDV SEENLKDLKS 240
  241 TLAAATFLTL CQFVTQDKLK QELNNAFQGI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle