Protein Overview: ARFL_ARATH

General Information:
Name(s) found:	ARFL_ARATH [Swiss-Prot]
Description(s) found: SHOW ONLY BEST	gi\|49616359\|gb\|AAT67076.1\| ARF12 [Arabidopsis thaliana] [NCBI NR] gi\|46576671\|sp\|Q9XID4.2\|ARFL_ARATH RecName: Full=Auxin response factor 12 [NCBI NR] gi\|42562516\|ref\|NP_174691.2\| ARF12 (AUXIN RESPONSE FACTOR 12); transcription factor [Arabidopsis thaliana] [NCBI NR] gi\|225898000\|dbj\|BAH30332.1\| hypothetical protein [Arabidopsis thaliana] [NCBI NR] Auxin response factor 12 OS=Arabidopsis thaliana GN=ARF12 PE=2 SV=2 [Swiss-Prot] Putative auxin response factor 12gi\|42562516\|ref\|NP_174691.2\| transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas] Tax_Id=3702 Putative auxin response factor 12 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta] \| Symbols: ARF12 \| ARF12 (AUXIN RESPONSE FACTOR 12); transcription factor \| chr1:12508526-12511498 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta] ARF12 [Arabidopsis thaliana] [nr-271106-contam.fasta] ARF12; transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta] Auxin response factor 12 [nr-271106-contam.fasta] \| Symbols: ARF12 \| auxin response factor 12 \| chr1:12508548-12511520 REVERSE LENGTH=593 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
Organism:	Arabidopsis thaliana
Length:	593 amino acids
Gene Ontology:
Cellular Component:	nucleus [IEA]
Biological Process:	regulation of transcription, DNA-dependent [IEA] regulation of transcription [IEA] response to hormone stimulus [IEA]
Molecular Function:	transcription factor activity [ISS]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESGNVVNAQ PELSGIIDGS KSYVYEQLWK LCAGPLCDIP KLGEKVYYFP QGHIELVETS  60
   61 TREELNELQP ICDLPSKLQC RVIAIHLKVE NNSDETYAEI TLMPDTTQVV IPTQNENQFR 120
  121 PLVNSFTKVL TASDTSAHGG FFVPKKHAIE CLPSLDMSQP LPAQELLAID LHGNQWRFNH 180
  181 NYRGTPQRHL LTTGWNAFTT SKKLVAGDVI VFVRGETGEL RVGIRRARHQ QGNIPSSIVS 240
  241 IDCMRHGVVA SAKHAFDNQC MFTVVYKPRS SKFIVSYDKF LDAVNNKFNV GSRFTMRLEG 300
  301 DDFSERRCFG TIIGVSDFSP HWKCSEWRSL EVQWDEFTSF PGPKKVSPWD IEHLMPAINV 360
  361 PRSFLLKNKR LREVNEIGSS SSHLLPPILT QGQENEQLSV ASPMNISLRY RDATEDAMNP 420
  421 SKLLMSYPVQ PMPKLNYNNQ MVTEMEENIT TKTGTNFRLF GVTLDTPPVI KDPIEEIGSE 480
  481 ISKLTEGKKF GLSQTLRSPT EIQNKQFSSS RTCTKVQMQG VTIGRAVDLS VLNGYDQLIL 540
  541 ELEKLFDIKG QLQTRNQWEI AFTDSDEDKM LVGDDPWPEF CNMVKKIFIQ KRR

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..102]	MSA	1.080982	View MSA. No confident structure predictions are available.
2	View Details	[103..244]	PSI-BLAST	34.69897	Solution Structure of the B3 DNA-Binding Domain of RAV1
3	View Details	[245..339]	MSA	3.108991	View MSA. Confident ab initio structure predictions are available.
4	View Details	[340..460]	MSA	1.134987	View MSA. No confident structure predictions are available.
5	View Details	[461..593]	FFAS03	1.24	Bud emergence mediator Bemp1

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Protein Overview: ARFL_ARATH

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: