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Protein Overview: ARFH_ARATH

General Information:
Name(s) found: ARFH_ARATH [Swiss-Prot]
Description(s) found:
Found 13 descriptions.
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  • Auxin response factor 8 OS=Arabidopsis thaliana GN=ARF8 PE=2 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 811 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA]
    Biological Process: flower development [IGI]
    regulation of transcription, DNA-dependent [TAS]
    response to auxin stimulus [IMP]
    Molecular Function: transcription factor activity [ISS][TAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLSTSGLGQ QGHEGEKCLN SELWHACAGP LVSLPSSGSR VVYFPQGHSE QVAATTNKEV  60
   61 DGHIPNYPSL PPQLICQLHN VTMHADVETD EVYAQMTLQP LTPEEQKETF VPIELGIPSK 120
  121 QPSNYFCKTL TASDTSTHGG FSVPRRAAEK VFPPLDYTLQ PPAQELIARD LHDVEWKFRH 180
  181 IFRGQPKRHL LTTGWSVFVS AKRLVAGDSV IFIRNEKNQL FLGIRHATRP QTIVPSSVLS 240
  241 SDSMHIGLLA AAAHASATNS CFTVFFHPRA SQSEFVIQLS KYIKAVFHTR ISVGMRFRML 300
  301 FETEESSVRR YMGTITGISD LDSVRWPNSH WRSVKVGWDE STAGERQPRV SLWEIEPLTT 360
  361 FPMYPSLFPL RLKRPWHAGT SSLPDGRGDL GSGLTWLRGG GGEQQGLLPL NYPSVGLFPW 420
  421 MQQRLDLSQM GTDNNQQYQA MLAAGLQNIG GGDPLRQQFV QLQEPHHQYL QQSASHNSDL 480
  481 MLQQQQQQQA SRHLMHAQTQ IMSENLPQQN MRQEVSNQPA GQQQQLQQPD QNAYLNAFKM 540
  541 QNGHLQQWQQ QSEMPSPSFM KSDFTDSSNK FATTASPASG DGNLLNFSIT GQSVLPEQLT 600
  601 TEGWSPKASN TFSEPLSLPQ AYPGKSLALE PGNPQNPSLF GVDPDSGLFL PSTVPRFASS 660
  661 SGDAEASPMS LTDSGFQNSL YSCMQDTTHE LLHGAGQINS SNQTKNFVKV YKSGSVGRSL 720
  721 DISRFSSYHE LREELGKMFA IEGLLEDPLR SGWQLVFVDK ENDILLLGDD PWESFVNNVW 780
  781 YIKILSPEDV HQMGDHGEGS GGLFPQNPTH L

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..113] deduced N/A No confident structure predictions are available.
    2 View Details [114..245] PSI-BLAST 41.221849 Solution Structure of the B3 DNA-Binding Domain of RAV1
    3 View Details [246..340] deduced N/A No confident structure predictions are available.
    4 View Details [341..572] MSA 6.305996 View MSA. No confident structure predictions are available.
    5 View Details [573..647] deduced N/A No confident structure predictions are available.
    6 View Details [648..811] FFAS03 1.02 Solution structure of RSGI RUH-024, a PB1 domain in human cDNA, KIAA0049


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.85

    Source: Reynolds et al. (2008)

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    Created and Maintained by: Michael Riffle