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Protein Overview: CE36772

General Information:
Name(s) found: CE36772 [WormBase]
Description(s) found:
Found 11 descriptions.
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  • WBGene00022387 zinc finger protein status:Partially_confirmed UniProt:Q9N2W0 protein_id:AAF60905.2 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 608 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEALink to PubMed article]
    Biological Process: axonal fasciculation [IMP]
    Molecular Function: nucleic acid binding [IEALink to PubMed article]
    zinc ion binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKQGIPSTS LAKNKLSYRC DLCDVTCTGQ DTYSAHVRGG KHLKTAQLHK KLGKPVPEDV  60
   61 PTIIAPGADG PTETKAKPKW HQQALPGGKI VIGINTVNFV GGTKLNSTGQ LEEKKREVAA 120
  121 AVSSVGRKTG GAAATTTIEV EDEKLRAMIA AEEVQPVGEE HVTEERDATG KLVQFHCKLC 180
  181 DCKFSDPNAK EIHIKGRRHR VSYRQKIDPT LVVDVKPSNK RSQEKRKNQL PAVHEPPSFM 240
  241 KTPWFAPPAP EGREFNIVDD RTINEKYAGL NPGVEFISNV DRLISDINES LKYVSDKIER 300
  301 DVRKIPEDVV ELPTTTTTTE QPPRTVLGCS RVGIIAKGTF IKGDRCAEVV LTCTPVPTSG 360
  361 LVEQIRRLFG ESTTSLTIEP DPESPSSLIV TANYFPNMKC RILITSAVVR KDDDSIVTGC 420
  421 AADKDLCIYA LASIRNTKWY DSHCQYLNSC QSVIRLLRDL RNKYPEVACL DDYKMELIVS 480
  481 NIIDSSPMSL GLSDAFKRIV EALASGYLYS AILSDPCETS RPNVLDALTD EQKHSLTALA 540
  541 QNFVRQIAFN QIHEILGIDR LQDTIDLPED APMLKRPLES NENAENAENL DDSPVSKKEK 600
  601 LDEEPADI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..148] PSI-BLAST 9.0 Solution Structure of the N-terminal Zinc Fingers of the Xenopus laevis double stranded RNA binding protein ZFa
    2 View Details [149..236] FFAS03 1.54 Solution Structure of the N-terminal Zinc Fingers of the Xenopus laevis double stranded RNA binding protein ZFa
    3 View Details [237..608] FFAS03 1.04 No description for 2o1pA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.414217765611205 bayes_pls_golite062009
    2
    Term Confidence Notes
  • binding
    		•  0.304205134456748 bayes_pls_golite062009
    3
    Term Confidence Notes
  • catalytic activity
    		•  0.188740936740089 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle