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Protein Overview: lpd-6

General Information:
Name(s) found: lpd-6 / CE37030 [WormBase]
Description(s) found:
Found 13 descriptions.
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  • WBGene00003062 locus:lpd-6 status:Confirmed UniProt:O44991 protein_id:CCD67360.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 573 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEALink to PubMed article]
    Biological Process: lipid storage [IMPLink to PubMed article]
    nematode larval development [IMPLink to PubMed articleLink to PubMed articleLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed article]
    lipid metabolic process [IMPLink to PubMed article]
    growth [IMPLink to PubMed articleLink to PubMed articleLink to PubMed article]
    reproduction [IMPLink to PubMed article]
    Molecular Function: nucleic acid binding [IEALink to PubMed article]
    zinc ion binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKMKKGKKQR KSGAHNRGNV DALSQKDALY HQEKFVKKLQ KQKFLENKEI ELARQPHCLV  60
   61 IHRGDVGKYV KGLESDLRNL VEPNTAKNLK ILKRNNIKDF IVNGAVLGVT NMMVLTSSDA 120
  121 SLQLRMMRFS QGPTLSFKVK QYSLARHVVN CQKRPVATDK LFKSSPLVVM NGFGDGTQKH 180
  181 LSLVQTFIQN MFPSINVDTI QLGNLKRCLI VSYDEETDEI QMRHFAIRVV ASGLNKSVKK 240
  241 LMQAEKTMGK NIPNLSTYKD ISDYFLNPGQ LSDSEFEGDQ QEVELPQDIS EGRGCGVGQK 300
  301 SNVRLHEIGP RLTLELVKIE EGIDEGEVLY HKHNAKTPDE LIKLRAHMDK KKQMKKRREQ 360
  361 ESEQRVIRRL TIVKEQQDAE EAEVKAIREN AARKQAAATG QVEEVENQKE KDREIAMNRE 420
  421 RDLKRANEEW GTSEASKRPR YEDSRGGFRG GFRGRGEDRG GFRGRGGDRG GFRGRDRDGG 480
  481 GFRGRSVDRG GFRGGGGDRG GFRGRSSDRG GDRGGFRGRS GDRDGGFRGG FGGRGGGGFR 540
  541 GGDRGGFRGR GGGGGFRGGR GGDRGGGFRG GRR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..329] FFAS03 4.18 Crystal structure of probable ribosomal biogenesis protein from Aeropyrum pernix K1
    2 View Details [330..573] PSI-BLAST 29.0 No description for 1y0fB was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.323890296968392 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.59

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle