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Protein Overview: RH7_ARATH

General Information:
Name(s) found: RH7_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|8809632|dbj|BAA97183.1| RNA helicase [Arabidopsis thaliana] [NCBI NR]
  • gi|30793911|gb|AAP40408.1| putative DEAD/DEAH box RNA helicase PRH75 [Arabidopsis thaliana] [NCBI NR]
  • gi|15810145|gb|AAL07216.1| putative RNA helicase [Arabidopsis thaliana] [NCBI NR]
  • gi|15241726|ref|NP_201025.1| PRH75; ATP-dependent helicase/ DEAD/H-box RNA helicase binding [Arabidopsis thaliana] [NCBI NR]
  • gi|108861902|sp|Q39189.2|RH7_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 7 [NCBI NR]
  • DEAD-box ATP-dependent RNA helicase 7 OS=Arabidopsis thaliana GN=RH7 PE=1 SV=2 [Swiss-Prot]
  • (Q9LVB7) RNA helicase (Putative DEAD/DEAH box RNA helicase PRH75) [athaliana3702.FASTAC.txt]
  • putative DEAD/DEAH box RNA helicase PRH75 [Arabidopsis thaliana]gi|15810145|gb|AAL07216.1| putative RNA helicase [Arabidopsis thaliana]gi|8809632|dbj|BAA97183.1| RNA helicase [Arabidopsis thaliana]gi|15241726|ref|NP_201025.1| DEAD box RNA helicase (PRH [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 DEAD box RNA helicase (PRH75) [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: PRH75 | PRH75 (plant RNA helicase 75); ATP-dependent helicase | chr5:24997768-25001105 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • PRH75; ATP-dependent helicase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • DEAD-box ATP-dependent RNA helicase 7 [nr-271106-contam.fasta]
  • putative RNA helicase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative DEAD/DEAH box RNA helicase PRH75 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • RNA helicase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: PRH75 | DEAD box RNA helicase (PRH75) | chr5:24980542-24983879 REVERSE LENGTH=671 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 671 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    nucleolus [IDA]
    Biological Process: RNA metabolic process [TAS]
    Molecular Function: DEAD/H-box RNA helicase binding [ISS]
    ATP-dependent helicase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSLMLSDKK EEKKMKKKMA LDTPELDSKK GKKEQKLKLS DSDEEESEKK KSKKKDKKRK  60
   61 ASEEEDEVKS DSSSEKKKSS KKVKLGVEDV EVDNPNAVSK FRISAPLREK LKANGIEALF 120
  121 PIQASTFDMV LDGADLVGRA RTGQGKTLAF VLPILESLVN GPAKSKRKMG YGRSPSVLVL 180
  181 LPTRELAKQV AADFDAYGGS LGLSSCCLYG GDSYPVQEGK LKRGVDIVVG TPGRIKDHIE 240
  241 RQNLDFSYLQ FRVLDEADEM LRMGFVEDVE LILGKVEDST KVQTLLFSAT LPSWVKNISN 300
  301 RFLKRDQKTI DLVGNDKMKA SNSVRHIAIP CNKAAMARLI PDIISCYSSG GQTIIFAETK 360
  361 VQVSELSGLL DGSRALHGEI PQSQREVTLA GFRNGKFATL VATNVAARGL DINDVQLIIQ 420
  421 CEPPREVEAY IHRSGRTGRA GNTGVAVTLY DSRKSSVSRI EKEAGIKFEH LAAPQPDEIA 480
  481 RSGGMEAAEK VKQVCDSVVP AFLEAAKELL ETSGLSAEVL LAKALAKTAG FTEIKKRSLL 540
  541 TSMENYVTLH LEAGKPIYSP SFVYGLLRRV LPDDKVEMIE GLSLTADKTG AVFDVKQSDL 600
  601 DLFIAGAQKS AGSMSLEVVK VMPKLQEREP LPQKRFGGGG RGNRFGGGGG NRFGGGGGRG 660
  661 RGGSGGRGQR Y

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..474] PSI-BLAST 80.0 No description for 2db3A was found.
    2 View Details [475..595] PSI-BLAST 18.0 Nucleotide excision repair enzyme UvrB
    3 View Details [596..671] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle