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Protein Overview: GATA9_ARATH

General Information:
Name(s) found: GATA9_ARATH [Swiss-Prot]
Description(s) found:
Found 19 descriptions.
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  • GATA transcription factor 9 OS=Arabidopsis thaliana GN=GATA9 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 308 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA]
    Biological Process: circadian rhythm [IEP]
    response to light stimulus [IEP]
    Molecular Function: transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKIAPELFL VAGNPDSFVV DDLLDFSNDD GEVDDGLNTL PDSSTLSTGT LTDSSNSSSL  60
   61 FTDGTGFSDL YIPNDDIAEL EWLSNFVEES FAGEDQDKLH LFSGLKNPQT TGSTLTHLIK 120
  121 PEPELDHQFI DIDESNVAVP AKARSKRSRS AASTWASRLL SLADSDETNP KKKQRRVKEQ 180
  181 DFAGDMDVDC GESGGGRRCL HCATEKTPQW RTGPMGPKTL CNACGVRYKS GRLVPEYRPA 240
  241 SSPTFVMARH SNSHRKVMEL RRQKEMRDEH LLSQLRCENL LMDIRSNGED FLMHNNTNHV 300
  301 APDFRHLI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..143] MSA 3.216997 View MSA. No confident structure predictions are available.
    2 View Details [144..308] PSI-BLAST 10.154902 Erythroid transcription factor GATA-1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.270879137859077 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle