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Protein Overview: Y1790_ARATH

General Information:
Name(s) found: Y1790_ARATH [Swiss-Prot]
Description(s) found:
Found 16 descriptions.
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  • BTB/POZ domain-containing protein At1g67900 OS=Arabidopsis thaliana GN=At1g67900 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 631 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: response to light stimulus [IEA][ISS]
    Molecular Function: protein binding [IEA]
    signal transducer activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFMKLGSRP DTFYTSEDLR CVSSEVSSDF TIEVSGSRYL LHKFPLLSKC LRLQRMCSES  60
   61 PESIIQLPEF PGGVEAFELC AKFCYGITIT ISAYNIVAAR CAAEYLQMSE EVEKGNLVYK 120
  121 LEVFFNSCIL NGWRDSIVTL QTTKAFPLWS EDLAITSRCI EAIASKVLSH PSKVSLSHSH 180
  181 SRRVRDDDMS SNRAAASSRG WWAEDIAELG IDLYWRTMIA IKSGGKVPAS LIGDALRVYA 240
  241 SKWLPTLQRN RKVVKKKEDS DSDSDTDTSS KHRLLLESII SLLPAEKGAV SCSFLLKLLK 300
  301 AANILNASTS SKMELARRVA LQLEEATVSD LLIPPMSYKS ELLYDVDIVA TILEQFMVQG 360
  361 QTSPPTSPLR GKKGMMDRRR RSRSAENIDL EFQESRRSSS ASHSSKLKVA KLVDGYLQQI 420
  421 ARDVNLPLSK FVTLAESVPE FSRLDHDDLY RAIDIYLKAH KNLNKSERKR VCRVLDCKKL 480
  481 SMEACMHAAQ NEMLPLRVVV QVLFYEQARA AAATNNGEKN TTELPSNIKA LLAAHNIDPS 540
  541 NPNAAAFSTT TSIAAPEDRW SVSGLKSPKS KLSGTLRSKL AEDEEVDERF MNGDGGRTPS 600
  601 RFKAFCAIPG RPKKMFSKLL SINRNSSDKN C

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..132] PSI-BLAST 23.69897 No description for 2nn2A was found.
    2 View Details [133..265] MSA 3.668987 View MSA. No confident structure predictions are available.
    3 View Details [266..460] MSA 2.177997 View MSA. No confident structure predictions are available.
    4 View Details [461..631] MSA 3.074978 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle