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Protein Overview: VIP4_ARATH

General Information:
Name(s) found: VIP4_ARATH [Swiss-Prot]
Description(s) found:
Found 15 descriptions.
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  • Protein LEO1 homolog OS=Arabidopsis thaliana GN=VIP4 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 625 amino acids

    Gene Ontology:
    Cellular Component: cytosol [IDA]
    Biological Process: negative regulation of flower development [IMP]
    vernalization response [IMP]
    Molecular Function: protein binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKGEKRSEM MLNLFGDNSE EEEIESEHEC NRRQPNYASD EAEGGVEPEG EGEAEVEVHG  60
   61 EAEAESDGEQ GDVELDPGES EGEREQSSQE ADPQEESEAR DSDSDNKEEE HGGRVAKKRR 120
  121 QEVVESGSER SGEKHYESED EEVDQTRSPR SPSEEKEEVQ VAQSDVNIRN VFGSSDDEDA 180
  181 EEYVRNDVEQ DEHRSPIEDE EGSEKDLRPD DMVLDDIIPE EDPQYESEAE HVEARYRERP 240
  241 VGPPLEVEVP FRPPPGDPVK MNMIKVSNIM GIDPKPFDAK TFVEEDTFMT DEPGAKNRIR 300
  301 LDNNIVRHRF VKSRDGKTYS ESNARFVRWS DGSLQLLIGN EVLNITEQDA KEDQNHLFIK 360
  361 HEKGILQSQG RILKKMRFTP SSLTSNSHRL LTAIVESRQK KAFKVKNCVT DIDPEREKEK 420
  421 REKAESQNLK ASTKLSQARE KIKRKYPLPV ERRQLSTGYL EDALDEDDED YRSNRGYEED 480
  481 LEAEAQRERR ILNAKKSHKG IPGRSSMTSA RPSRRQMEYS ESEREESEYE TEEEEEEKSP 540
  541 ARGRGKDSED EYEEDAEEDE EERGKSNRYS DEDEEEEEVA GGRAEKDHRG SGRKRKGIES 600
  601 DEEESPPRKA PTHRRKAVID DSDED

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..184] MSA 8.113997 View MSA. No confident structure predictions are available.
    2 View Details [185..384] MSA 1.10097 View MSA. No confident structure predictions are available.
    3 View Details [385..625] MSA 1.083989 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle