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Protein Overview: ATHB8_ARATH

General Information:
Name(s) found: ATHB8_ARATH [Swiss-Prot]
Description(s) found:
Found 19 descriptions.
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  • Homeobox-leucine zipper protein ATHB-8 OS=Arabidopsis thaliana GN=ATHB-8 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 833 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA][ISS]
    Biological Process: positive regulation of cell proliferation [IMP]
    primary shoot apical meristem specification [IMP]
    regulation of transcription, DNA-dependent [ISS]
    positive regulation of cell differentiation [IMP]
    xylem development [IMP]
    procambium histogenesis [IEP]
    response to auxin stimulus [IEP]
    meristem initiation [IMP]
    Molecular Function: DNA binding [ISS]
    transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGGGSNNSHN MDNGKYVRYT PEQVEALERL YNDCPKPSSM RRQQLIRECP ILSNIEPKQI  60
   61 KVWFQNRRCR EKQRKEASRL QAVNRKLTAM NKLLMEENDR LQKQVSHLVY ENSYFRQHPQ 120
  121 NQGNLATTDT SCESVVTSGQ HHLTPQHQPR DASPAGLLSI ADETLTEFIS KATGTAVEWV 180
  181 QMPGMKPGPD SIGIVAISHG CTGIAARACG LVGLDPTRVA EILKDKPCWL RDCRSLDIVN 240
  241 VLSTANGGTL ELIYMQLYAP TTLAPARDFW MLRYTSVMED GSLVICERSL NNTQNGPSMP 300
  301 PSPHFVRAEI LPSGYLIRPC EGGGSILHIV DHFDLEPWSV PEVLRSLYES STLLAQRTTM 360
  361 AALRYLRQIS QEISQPNVTG WGRRPAALRA LSQRLSKGFN EAVNGFSDEG WSILESDGID 420
  421 DVTLLVNSSP TKMMMTSSLP FANGYTSMPS AVLCAKASML LQNVPPSILL RFLREHRQEW 480
  481 ADNSIDAYSA AAIKAGPCSL PIPRPGSFGG QVILPLAHTI ENEEFMEVIK LESLGHYQED 540
  541 MMMPADIFLL QMCSGVDENA VESCAELIFA PIDASFSDDA PIIPSGFRII PLDSKSEGLS 600
  601 PNRTLDLASA LDVGSRTAGD SCGSRGNSKS VMTIAFQLAF EMHMQENVAS MARQYVRSVI 660
  661 ASVQRVALAL SPSSHQLSGL RPPPASPEAH TLARWISHSY RCYLGVDLLK PHGTDLLKSL 720
  721 WHHPDAVMCC SLKALSPVFT FANQAGLDML ETTLVALQDI TLDKIFDNNN GKKTLSSEFP 780
  781 QIMQQGFMCM DGGICMSSMG RAVTYEKAVG WKVLNDDEDP HCICFMFLNW SFI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..130] PSI-BLAST 15.221849 Solution structure of the homeobox domain of the human paired box protein Pax-6
    2 View Details [131..378] PSI-BLAST 25.69897 No description for 2psoA was found.
    3 View Details [379..553] MSA 1.061979 View MSA. No confident structure predictions are available.
    4 View Details [554..678] deduced N/A No confident structure predictions are available.
    5 View Details [679..833] Pfam 88.0 No description for PF08670.3 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

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    Created and Maintained by: Michael Riffle