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Protein Overview: VEP1_ARATH

General Information:
Name(s) found: VEP1_ARATH [Swiss-Prot]
Description(s) found:
Found 18 descriptions.
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  • 3-oxo-Delta(4,5)-steroid 5-beta-reductase OS=Arabidopsis thaliana GN=VEP1 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 388 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: xylem and phloem pattern formation [IMP]
    response to wounding [IEP]
    Molecular Function: catalytic activity [IEA]
    binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSWWWAGAIG AAKKKLDEDE PSQSFESVAL IIGVTGIVGN SLAEILPLSD TPGGPWKVYG  60
   61 VARRPRPTWN ADHPIDYIQC DVSDAEDTRS KLSPLTDVTH VFYVTWTNRE SESENCEANG 120
  121 SMLRNVLQAI IPYAPNLRHV CLQTGTKHYL GPFTNVDGPR HDPPFTEDMP RLQIQNFYYT 180
  181 QEDILFEEIK KIETVTWSIH RPNMIFGFSP YSLMNIVGTL CVYAAICKHE GSPLLFPGSK 240
  241 KAWEGFMTAS DADLIAEQQI WAAVDPYAKN EAFNCNNADI FKWKHLWKIL AEQFGIEEYG 300
  301 FEEGKNLGLV EMMKGKERVW EEMVKENQLQ EKKLEEVGVW WFADVILGVE GMIDSMNKSK 360
  361 EYGFLGFRNS NNSFISWIDK YKAFKIVP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..388] PSI-BLAST 68.69897 dTDP-glucose 4,6-dehydratase (RmlB)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.79741889688267 bayes_pls_golite062009
  • oxidoreductase activity
    		•  0.881088609158401 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.63

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle