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Protein Overview: PKSC_ARATH

General Information:
Name(s) found: PKSC_ARATH [Swiss-Prot]
Description(s) found:
Found 18 descriptions.
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  • Type III polyketide synthase C OS=Arabidopsis thaliana GN=At4g00040 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 385 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: metabolic process [IEA]
    phenylpropanoid biosynthetic process [ISS]
    biosynthetic process [IEA]
    Molecular Function: transferase activity, transferring acyl groups other than amino-acyl groups [IEA]
    catalytic activity [IEA]
    acyltransferase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLVSARVEKQ KRVAYQGKAT VLALGKALPS NVVSQENLVE EYLREIKCDN LSIKDKLQHL  60
   61 CKSTTVKTRY TVMSRETLHK YPELATEGSP TIKQRLEIAN DAVVQMAYEA SLVCIKEWGR 120
  121 AVEDITHLVY VSSSEFRLPG GDLYLSAQLG LSNEVQRVML YFLGCYGGLS GLRVAKDIAE 180
  181 NNPGSRVLLT TSETTVLGFR PPNKARPYNL VGAALFGDGA AALIIGADPT ESESPFMELH 240
  241 CAMQQFLPQT QGVIDGRLSE EGITFKLGRD LPQKIEDNVE EFCKKLVAKA GSGALELNDL 300
  301 FWAVHPGGPA ILSGLETKLK LKPEKLECSR RALMDYGNVS SNTIFYIMDK VRDELEKKGT 360
  361 EGEEWGLGLA FGPGITFEGF LMRNL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..385] PSI-BLAST 106.0 Chalcone synthase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  2.14505178497871 bayes_pls_golite062009
  • transferase activity
    		•  1.45483382098717 bayes_pls_golite062009
  • transferase activity, transferring acyl groups
    		•  1.12155569250025 bayes_pls_golite062009
  • transferase activity, transferring acyl groups other than amino-acyl groups
    		•  1.04684145062403 bayes_pls_golite062009
  • acyltransferase activity
    		•  0.932050235566705 bayes_pls_golite062009
  • naringenin-chalcone synthase activity
    		•  0.385839480590315 bayes_pls_golite062009
  • 3-oxoacyl-[acyl-carrier-protein] synthase activity
    		•  0.130687514570417 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.67

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle