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Protein Overview: gi|18396341, gi|...

General Information:
Name(s) found: gi|6728978 [NCBI NR]
gi|30725622 [NCBI NR]
gi|27311855 [NCBI NR]
gi|26452125 [NCBI NR]
gi|18396341 [NCBI NR]
Description(s) found:
Found 15 descriptions.
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  • gi|6728978|gb|AAF26976.1|AC018363_21 unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|30725622|gb|AAP37833.1| At3g02840 [Arabidopsis thaliana] [NCBI NR]
  • gi|27311855|gb|AAO00893.1| expressed protein [Arabidopsis thaliana] [NCBI NR]
  • gi|26452125|dbj|BAC43151.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18396341|ref|NP_566184.1| immediate-early fungal elicitor family protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 379 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: response to other organism [ISS]
    response to ozone [IEP]
    Molecular Function: binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLPWRSRGG VAKRRNQLIS GDISVVETKI PVQLRSPSRI ERIQSPRVLL TPRDAVEISR  60
   61 RLQNAAAREE YAECLEIVSK IKNLGRGGDT NKKCLVQNGS VLALSSCFER FAAARDGHMR 120
  121 LLEEILFVLS SWLPLNRSEG FNKMGSTASL NCLVRFLNGK DAKTRQNAAF CIREVIAVDK 180
  181 RYVYALTDVE GACEGLVKII RDSVSTSSTK ASLMVIYRAI SSNDKITEKF VKLGLVELIT 240
  241 EMMVNNAEKS VCERSLVVLN ATCDNEQGKE DVLRNALIVP LLVKKILRVS DLATQCSVSI 300
  301 LWKLWKNKKD GECDDRLLVE ALQVGAFEKL LVLLQVGCED KTKEKASELL RNLNRCRNEI 360
  361 EKTNCVDSSM HLKNVKKSF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..379] PSI-BLAST 70.39794 Mouse Importin alpha- phosphorylated SV40 CN peptide complex

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.373576425899935 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle