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Protein Overview: VP322_ARATH

General Information:
Name(s) found: VP322_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|75213588|sp|Q9SZE4.1|VP322_ARATH RecName: Full=Vacuolar protein sorting-associated protein 32 homolog 2; Short=AtVPS32-2; AltName: Full=Charged multivesicular body protein 4 homolog 2; AltName: Full=ESCRT-III complex subunit VPS32 homolog 2 [NCBI NR]
  • pir||T08971 hypothetical protein F19B15.190 - Arabidopsis thaliana [NCBI NR]
  • gi|7269814|emb|CAB79674.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|4972062|emb|CAB43930.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18377478|gb|AAL66905.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15233464|ref|NP_194645.1| SNF7.1 [Arabidopsis thaliana] [NCBI NR]
  • gi|14596131|gb|AAK68793.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|145334175|ref|NP_001078468.1| SNF7.1 [Arabidopsis thaliana] [NCBI NR]
  • Vacuolar protein sorting-associated protein 32 homolog 2 OS=Arabidopsis thaliana GN=VPS32.2 PE=1 SV=1 [Swiss-Prot]
  • (Q9SZE4) Hypothetical protein [athaliana3702.FASTAC.txt]
  • putative protein [Arabidopsis thaliana]gi|4972062|emb|CAB43930.1| putative protein [Arabidopsis thaliana]gi|18377478|gb|AAL66905.1| putative protein [Arabidopsis thaliana]gi|14596131|gb|AAK68793.1| putative protein [Arabidopsis thaliana]gi|7485746|pir [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 SNF7 family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: SNF7.1 | SNF7.1 | chr4:14381025-14382348 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: SNF7.1 | SNF7 family protein | chr4:14381019-14382342 FORWARD LENGTH=219 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 219 amino acids

    Gene Ontology:
    Cellular Component: ESCRT III complex [ISS]
    Biological Process: vesicle-mediated transport [ISS]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMNRLFGKPK QEANALQTLD KLNETLEMLE KKEKVLLKKA GAEVEKAKEY SRAKNKRAAI  60
   61 QCLKRKRLYE GQVEQLGNFQ LRIHDQMIML EGAKATTETV DALRSGASAM KAMQKATNID 120
  121 DVDKTMDEIN EQTENMKQIQ EALATPMGAA ADFDEDELAA ELDELESEEL ESQLLQPATT 180
  181 APPLPSVPVP AGRQPARPVP QKRTAEEEEL AALQAEMAL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..219] PSI-BLAST 19.39794 No description for 2gd5A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle