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Protein Overview: PTR38_ARATH

General Information:
Name(s) found: PTR38_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|6996269|emb|CAB75495.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15231202|ref|NP_190152.1| proton-dependent oligopeptide transport (POT) family protein [Arabidopsis thaliana] [NCBI NR]
  • pir||T47506 hypothetical protein F9K21.240 - Arabidopsis thaliana [NCBI NR]
  • Protein NRT1/ PTR FAMILY 2.6 OS=Arabidopsis thaliana GN=NPF2.6 PE=2 SV=1 [Swiss-Prot]
  • (Q9M1E1) Hypothetical protein [athaliana3702.FASTAC.txt]
  • putative protein [Arabidopsis thaliana]gi|11357927|pir||T47506 hypothetical protein F9K21.240 - Arabidopsis thalianagi|15231202|ref|NP_190152.1| proton-dependent oligopeptide transport (POT) family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Proton-dependent oligopeptide transport (POT) family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | proton-dependent oligopeptide transport (POT) family protein | chr3:16773190-16775226 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • transporter [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Major facilitator superfamily protein | chr3:16762205-16764241 FORWARD LENGTH=557 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Probable nitrate excretion transporter 2 OS=Arabidopsis thaliana GN=At3g45660 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 557 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEA][ISS]
    Biological Process: oligopeptide transport [IEA][ISS]
    Molecular Function: transporter activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGSVSRDAE ALKSADSSTR RSGGRITFPF MIVTLFGLTL ATLGWLQNLI VYLIEEYNMK  60
   61 SIAAAKILNI FSGFTFMFPA IGAIAADSFF GTIPVILVSS FISLVGVVLL ALTTLFDSLR 120
  121 PQACETASKL CQAPTNIQLG VLYTAITLGC VGAGGLRFTL ATAGANQYEK TKDQGSFFNW 180
  181 FFFTWYLAAS ISATAIVYAE ENISWSFGFG LCVAANLLGL IVFISGKKFY KHDKPLGSPF 240
  241 TSLLRVIFAA IRKRKAVVST NEKDYHSESK KTPTKSFRFF NRAALKQDDE VNSDGTIHNQ 300
  301 WRLCSVQQVE DFKAVIRIIP LVLAILFLST PIAMQLGLTV LQGLVMDRRL GPHFKIPAGS 360
  361 LQVITLLSTC LFIIVNDRFL YPFYQKLTGK FPTPIQRVGI GHVFNILSMA VTAIVEAKRL 420
  421 KIVQKGHFLG SSSVADMSVL WLFPPLVIVG IGEAFHFPGN VALCYQEFPE SMRSTATSIT 480
  481 SVLIGICFYT STALIDLIQK TTAWLPDDIN HGRVDNVYWI LVIGGVLNLG YFLVCSWFYK 540
  541 YRNLENADHE QDANVSH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..371] PSI-BLAST 4.045757 No description for 2gfpA was found.
    2 View Details [372..557] FFAS03 1.53 No description for 2v8nA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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