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Protein Overview: gi|42573257, gi|...

General Information:
Name(s) found: gi|7378613 [NCBI NR]
gi|42573257 [NCBI NR]
gi|15242721 [NCBI NR]
gi|124301008 [NCBI NR]
gi|11290064 [NCBI NR]
Description(s) found:
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  • gi|7378613|emb|CAB83289.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|42573257|ref|NP_974725.1| OTU-like cysteine protease family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15242721|ref|NP_195953.1| OTU-like cysteine protease family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|124301008|gb|ABN04756.1| At5g03330 [Arabidopsis thaliana] [NCBI NR]
  • pir||T48354 hypothetical protein F12E4.60 - Arabidopsis thaliana [NCBI NR]
  • (Q9LZF7) Hypothetical protein [athaliana3702.FASTAC.txt]
  • putative protein [Arabidopsis thaliana]gi|11290064|pir||T48354 hypothetical protein F12E4.60 - Arabidopsis thalianagi|42573257|ref|NP_974725.1| OTU-like cysteine protease family protein [Arabidopsis thaliana]gi|15242721|ref|NP_195953.1| OTU-like cystei [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 OTU-like cysteine protease family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | OTU-like cysteine protease family protein | chr5:807727-809607 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • cysteine-type peptidase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Cysteine proteinases superfamily protein | chr5:807728-809608 FORWARD LENGTH=356 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • At5g03330 OS=Arabidopsis thaliana GN=F12E4_60 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 356 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: cysteine-type peptidase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSHEENTSI VEWFLGPHPY TYPPYGIEMI HEDDEVAVAH HHHHHQSGEY YREYEDHRSS  60
   61 DVDNDEIIAR TLQDDFLQLE IAESNDYSHQ NQQQQHQQEG YTNNYSNNNN GYAWNDQSPA 120
  121 VDYSSEWIGN DNDQDGRSDD SVNVFSCSSP SDTDEYVYSW ESDQCDADGE FGRRLNQMVP 180
  181 IPYIPKINGE IPPEEEAVSD HERLRNRLEM FDFTEVKVPG DGNCQFRALA DQLYKTADRH 240
  241 KHVRRQIVKQ LKSRPDSYQG YVPMDFSDYL RKMSRSGEWG DHVTLQAAAD AYRVKIVVLT 300
  301 SFKDTCYIEI LPTSQESKGV IFLSFWAEVH YNAIYLNRDT SETELQRKRK WWRFGN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..85] MSA 4.086992 View MSA. No confident structure predictions are available.
    2 View Details [86..200] MSA 1.207995 View MSA. No confident structure predictions are available.
    3 View Details [201..356] PSI-BLAST 13.0 Structure of Otubain-2


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle