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Protein Overview: gi|18408624, gi|...

General Information:
Name(s) found: gi|18408624 [NCBI NR]
gi|12597758 [NCBI NR]
Description(s) found:
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  • gi|18408624|ref|NP_564885.1| hydrolase [Arabidopsis thaliana] [NCBI NR]
  • gi|12597758|gb|AAG60071.1|AC013288_5 unknown protein [Arabidopsis thaliana] [NCBI NR]
  • (Q9C9N8) Hypothetical protein [athaliana3702.FASTAC.txt]
  • unknown protein [Arabidopsis thaliana]gi|18408624|ref|NP_564885.1| expressed protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Expressed protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | hydrolase | chr1:24945903-24948015 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Class I glutamine amidotransferase-like superfamily protein | chr1:24942240-24944352 FORWARD LENGTH=433 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Class I glutamine amidotransferase-like domain-containing protein OS=Arabidopsis thaliana GN=F4N21_3 PE=4 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 433 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: glutamine metabolic process [IEA]
    Molecular Function: hydrolase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNPSVNDLS QVLPRVLVVS RRTLRKNKFV DFVGEYHLDL IVENGAVPVI VPRVAGVHKL  60
   61 LESFKPIHGV LLCEGEDIDP SLYESEISSL SPQELDEIRK THASDTAIDK EKDSIEFALA 120
  121 KLCLEQNIPY LGICRGSQVL NVACGGSLYQ DLEKEVTIKV PEEHKRNHID YDDYDGYRHE 180
  181 VKIVKNSPLH KWFKDSLDEE KMEILVNSYH HQGVKRLAQR FVPMAFAPDG LIEGFYDPDM 240
  241 YNPEEGKFLM GLQFHPERMR KNGSDEFDFP GCPVAYQEFA KAVIACQKKV NSFLSVPKKL 300
  301 ELNPEMENKR KILVRSFSLA RSMYTRSHSL KNQSTESELE VGAEFLESNT ALSVQQEMRL 360
  361 KEMGATMRNG GSFTEKLRLD EKKQRKAMNI MKNMNIERLS ELMAFYHLMG KISSEVLERK 420
  421 LHASVSDLNL TPQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..433] PSI-BLAST 83.154902 GMP synthetase; GMP synthetase, central domain; GMP synthetase C-terminal dimerisation domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • ligase activity
    		•  1.86890906127173 bayes_pls_golite062009
  • catalytic activity
    		•  1.30391542469987 bayes_pls_golite062009
  • anthranilate synthase activity
    		•  1.21184543688778 bayes_pls_golite062009
  • oxo-acid-lyase activity
    		•  0.0620506742330145 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle