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Protein Overview: NLP9_ARATH

General Information:
Name(s) found: NLP9_ARATH [Swiss-Prot]
Description(s) found:
Found 13 descriptions.
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  • Protein NLP9 OS=Arabidopsis thaliana GN=NLP9 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 894 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENPSASRDN KGFCFPDIPV EEMDGWVKNL ISEEDMFSSS STSELMNFES FASWCNSPSA  60
   61 ADILFTQYGL STSQSIIPFG GLEGSYACEK RPLDCTSVPR SLSHSLDEKM LKALSLFMEF 120
  121 SGEGILAQFW TPIKTGDQYM LSTCDQAYLL DSRLSGYREA SRRFTFSAEA NQCSYPGLPG 180
  181 RVFISGVPEW TSNVMYYKTA EYLRMKHALD NEVRGSIAIP VLEASGSSCC AVLELVTCRE 240
  241 KPNFDVEMNS VCRALQAVNL QTSTIPRRQY LSSNQKEALA EIRDVLRAVC YAHRLPLALA 300
  301 WIPCSYSKGA NDELVKVYGK NSKECSLLCI EETSCYVNDM EMEGFVNACL EHYLREGQGI 360
  361 VGKALISNKP SFSSDVKTFD ICEYPLVQHA RKFGLNAAVA TKLRSTFTGD NDYILEFFLP 420
  421 VSMKGSSEQQ LLLDSLSGTM QRLCRTLKTV SDAESIDGTE FGSRSVEMTN LPQATVSVGS 480
  481 FHTTFLDTDV NSTRSTFSNI SSNKRNEMAG SQGTLQQEIS GARRLEKKKS STEKNVSLNV 540
  541 LQQYFSGSLK DAAKSLGVCP TTLKRICRQH GIMRWPSRKI NKVNRSLRKI QTVLDSVQGV 600
  601 EGGLKFDSVT GEFVAVGPFI QEFGTQKSLS SHDEDALARS QGDMDEDVSV EPLEVKSHDG 660
  661 GGVKLEEDVE TNHQAGPGSL KKPWTWISKQ SGLIYSDDTD IGKRSEEVNK DKEDLCVRRC 720
  721 LSSVALAGDG MNTRIERGNG TVEPNHSISS SMSDSSNSSG AVLLGSSSAS LEQNWNQIRT 780
  781 HNNSGESGSS STLTVKATYR EDTVRFKLDP YVVGCSQLYR EVAKRFKLQE GAFQLKYLDD 840
  841 EEEWVMLVTD SDLHECFEIL NGMRKHTVKF LVRDIPNTAM GSSAGSNGYL GTGT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..95] deduced N/A No confident structure predictions are available.
    2 View Details [96..281] MSA 4.050971 View MSA. No confident structure predictions are available.
    3 View Details [282..520] MSA 1.081982 View MSA. No confident structure predictions are available.
    4 View Details [521..626] Pfam 33.161151 No description for PF02042.7 was found. No confident structure predictions are available.
    5 View Details [627..772] deduced N/A No confident structure predictions are available.
    6 View Details [773..894] PSI-BLAST 18.09691 Solution Structure of the PB1 domain of PKCiota


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle