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Protein Overview: gi|5262780, gi|7...

General Information:
Name(s) found: gi|7486981 [NCBI NR]
gi|7268886 [NCBI NR]
gi|5262780 [NCBI NR]
gi|15233432 [NCBI NR]
Description(s) found:
Found 12 descriptions.
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  • pir||T10632 hypothetical protein T13K14.60 - Arabidopsis thaliana [NCBI NR]
  • gi|7268886|emb|CAB79090.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|5262780|emb|CAB45885.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15233432|ref|NP_193822.1| MS5 (MALE-STERILE 5) [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 450 amino acids

    Gene Ontology:
    Cellular Component: nucleus [ISS]
    Biological Process: microsporogenesis [IMP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCPCVERRAP PGVYYTPPPA RTSDHVAAMP MTERRRPPYS CSSSSERRDP FHIVHKVPSG  60
   61 DSPYVRAKHA QLIDKDPNRA ISLFWTAINA GDRVDSALKD MAVVMKQLGR SDEGIEAIKS 120
  121 FRYLCSFESQ DSIDNLLLEL YKKSGRIEEE AVLLEHKLQT LEQGMGFGGR VSRAKRVQGK 180
  181 HVIMTIEQEK ARILGNLGWV HLQLHNYGIA EQHYRFGFVT KIPNIDYCLV MRALGLERDK 240
  241 NKLCNLAICL MRMSRIPEAK SLLDDVRDSP AESECGDEPF AKSYDRAVEM LAEIESKKPE 300
  301 ADLSEKFYAG CSFVNRMKEN IAPGTANKNY SDVSSSPASV RPNSAGLYTQ PRRCRLFEEE 360
  361 TRGAARKLLF GKPQPFGSEQ MKILERGEEE PMKRKKLDQN MIQYLHEFVK DTADGPKSES 420
  421 KKSWADIAEE EEAEEEEEER LQGELKTAEM

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..62] PSI-BLAST 6.09691 No description for 2dbaA was found.
    2 View Details [63..450] PSI-BLAST 36.69897 The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.02652482814057 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle