YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|15229039, gi|...

General Information:
Name(s) found: gi|7576222 [NCBI NR]
gi|15229039 [NCBI NR]
gi|11358181 [NCBI NR]
Description(s) found:
Found 9 descriptions.
SHOW ALL
  • gi|7576222|emb|CAB87912.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15229039|ref|NP_190453.1| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] [NCBI NR]
  • pir||T49280 hypothetical protein T21J18.110 - Arabidopsis thaliana [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 144 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: nucleic acid binding [IEA][ISS]
    nucleotide binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADILSSIFY SINFFRDVGE VVSVRLIVDH RGKHVGCGFV EFASAYKAKK APLEKKNLRR  60
   61 LRNRYVVLDV AEIAPYPLRP KYNLAEKLWY EDYLREESLL IEADDLENKQ KKKKIKEKQI 120
  121 NVTETNLHNK ENQFTWVVDG MEQS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..144] PSI-BLAST 28.522879 Crystal Structure of UP1 Complexed With d(TTAGGGTTAG(6-MI)G); A Human Telomeric Repeat Containing 6-methyl-8-(2-deoxy-beta-ribofuranosyl)isoxanthopteridine (6-MI)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.950788308762215 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.29562225149076 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle