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Protein Overview: gi|9798395, gi|1...

General Information:
Name(s) found: gi|9798395 [NCBI NR]
gi|15230549 [NCBI NR]
gi|11357698 [NCBI NR]
Description(s) found:
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  • gi|9798395|emb|CAC03542.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15230549|ref|NP_190078.1| ATCHX11; monovalent cation:proton antiporter/ sodium:hydrogen antiporter [Arabidopsis thaliana] [NCBI NR]
  • pir||T51789 hypothetical protein F28D10_110 - Arabidopsis thaliana [NCBI NR]
  • (Q9FYB9) Hypothetical protein [athaliana3702.FASTAC.txt]
  • putative protein [Arabidopsis thaliana]gi|11357698|pir||T51789 hypothetical protein F28D10_110 - Arabidopsis thalianagi|15230549|ref|NP_190078.1| cation/hydrogen exchanger, putative (CHX11) [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Cation/hydrogen exchanger [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: CHX11, ATCHX11 | ATCHX11 (cation/H+ exchanger 11); monovalent cation:proton antiporter | chr3:16408023-16410126 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • ATCHX11; monovalent cation:proton antiporter [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 671 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEA]
    Biological Process: cation transport [IC]
    Molecular Function: sodium:hydrogen antiporter activity [ISS]
    monovalent cation:hydrogen antiporter activity [NAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFTFLMTVRT SRRVAFHSGK LPVVIGIVSF FAPLFSLSFL NLFTDNIDPH YMSLDKALAE  60
   61 RTVIVITQSQ ILLPSTTYIL LELKIINSEL GRLALSASAI NDMLGIFAMI VATTQATYIH 120
  121 VSHAIAYRDL VAVIIFFLIV FFVFKPMVQW IIDRTPEDKP VEDIYIHAVI LTAFASAAYF 180
  181 VFFNMKYVLG PLIIGIIIPE GPPLGSALEA KFERLTMNVF LPISITFSAM RCDGLRILSQ 240
  241 FTDIYFNIFL TLLILVIKLV ACLTLCLYYK LPRSESLAVS LILSYKSFVE FVLYEAVLEE 300
  301 KFISQATYAF LILYSLLSAG IVPMVVRSMY DPKRKYVNYQ KRDILHLEAN SGLRILTCLH 360
  361 KPENVSETIA FLQLFSSPIH DFPIAVTVLH LVKLVGQINP IIVSHDKKLK RLHKNSYIHT 420
  421 ANLAFRQFMQ ESLESVTVTT FTAFSHENLM HEDICTLALD RTTSMIVVPS GRKWTVDGMF 480
  481 ESDDLAARQL NQSLLDRAPC SIGILVDRGQ FSRKSYVTSK NRYNIDVGVL FIGGKDDREA 540
  541 LSLVKRMKYN PRVRVTVIRL IFDHEIESEW DYILDNEGLK DLKSTESNED ILYTERIVTS 600
  601 VVEVVKAVQL LAEEYDLMVV GRDHDMTSQD LSGLTEWVEL PELGVIGDLL AARDLNSKVS 660
  661 VLVVQQQQQQ T

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..352] PSI-BLAST 17.09691 Crystal structure of the Na+/H+ antiporter NhaA
    2 View Details [353..510] PSI-BLAST 3.69897 Crystal structure of a probable ATP binding protein from thermus themophilus HB8
    3 View Details [511..671] PSI-BLAST 4.0 No description for 2pfsA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • catalytic activity
    		•  0.298809327772818 bayes_pls_golite062009
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle