YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|67633478, gi|...

General Information:
Name(s) found: gi|67633478 [NCBI NR]
gi|25404457 [NCBI NR]
gi|15222579 [NCBI NR]
gi|12325011 [NCBI NR]
Description(s) found:
SHOW ONLY BEST
  • gi|67633478|gb|AAY78663.1| heavy-metal-associated domain-containing protein [Arabidopsis thaliana] [NCBI NR]
  • pir||F96664 hypothetical protein T12P18.3 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15222579|ref|NP_176578.1| heavy-metal-associated domain-containing protein [Arabidopsis thaliana] [NCBI NR]
  • gi|12325011|gb|AAG52453.1|AC010852_10 hypothetical protein; 5712-5156 [Arabidopsis thaliana] [NCBI NR]
  • (Q9CAK6) Hypothetical protein [athaliana3702.FASTAC.txt]
  • hypothetical protein T12P18.3 [imported] - Arabidopsis thalianagi|12325011|gb|AAG52453.1| hypothetical protein; 5712-5156 [Arabidopsis thaliana]gi|15222579|ref|NP_176578.1| heavy-metal-associated domain-containing protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Heavy-metal-associated domain-containing protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | heavy-metal-associated domain-containing protein | chr1:23738663-23739219 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • hypothetical protein; 5712-5156 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • heavy-metal-associated domain-containing protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • metal ion binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Heavy metal transport/detoxification superfamily protein | chr1:23735000-23735556 FORWARD LENGTH=113 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Heavy-metal-associated domain-containing protein OS=Arabidopsis thaliana GN=T12P18.3 PE=4 SV=1 [ARATH-contam.fasta]
  • Heavy-metal-associated domain-containing protein OS=Arabidopsis thaliana GN=T12P18.3 PE=2 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 113 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: metal ion transport [IEA]
    Molecular Function: metal ion binding [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIVWMGVYDQ RSKGKITKSI SDLPGIHSSY MDLKEGTLVV MGDVDPVELV RNLRKKWGKA  60
   61 KLTLYVPYDA LKEAKIAEAK QKREEIEREA LYRYNREIRD IFNDKEEQGC VIC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..113] PSI-BLAST 21.045757 Copper chaperone for superoxide dismutase, C-terminal domain; Copper chaperone for superoxide dismutase, N-terminal domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.246147507070597 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle