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Protein Overview: EPR1_ARATH

General Information:
Name(s) found: EPR1_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|5306260|gb|AAD41992.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • pir||C84672 hypothetical protein At2g27380 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|20197656|gb|AAM15181.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15225875|ref|NP_180307.1| ATEPR1; structural constituent of cell wall [Arabidopsis thaliana] [NCBI NR]
  • Proline-rich extensin-like protein EPR1 OS=Arabidopsis thaliana GN=EPR1 PE=2 SV=1 [Swiss-Prot]
  • (Q9ZQI0) At2g27380 protein (Hypothetical protein) [athaliana3702.FASTAC.txt]
  • hypothetical protein [Arabidopsis thaliana]gi|20197656|gb|AAM15181.1| hypothetical protein [Arabidopsis thaliana]gi|25407889|pir||C84672 hypothetical protein At2g27380 [imported] - Arabidopsis thalianagi|15225875|ref|NP_180307.1| proline-rich family pr [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Proline-rich family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: ATEPR1 | ATEPR1 (Arabidopsis thaliana extensin proline-rich 1) | chr2:11720489-11722774 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • hypothetical protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • ATEPR1 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: ATEPR1, EPR1 | extensin proline-rich 1 | chr2:11713411-11715696 FORWARD LENGTH=761 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 761 amino acids

    Gene Ontology:
    Cellular Component: endomembrane system [IEA]
    Biological Process: plant-type cell wall modification [TAS]
    seed germination [TAS]
    Molecular Function: structural constituent of cell wall [TAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVPLIDFLR FLVLILSLSG ASVAADATVK QNFNKYETDS GHAHPPPIYG APPSYTTPPP  60
   61 PIYSPPIYPP PIQKPPTYSP PIYPPPIQKP PTPTYSPPIY PPPIQKPPTP TYSPPIYPPP 120
  121 IQKPPTPTYS PPIYPPPIQK PPTPSYSPPV KPPPVQMPPT PTYSPPIKPP PVHKPPTPTY 180
  181 SPPIKPPVHK PPTPIYSPPI KPPPVHKPPT PIYSPPIKPP PVHKPPTPTY SPPVKPPPVH 240
  241 KPPTPIYSPP IKPPPVHKPP TPIYSPPVKP PPVQTPPTPI YSPPVKPPPV HKPPTPTYSP 300
  301 PVKSPPVQKP PTPTYSPPIK PPPVQKPPTP TYSPPIKPPP VKPPTPIYSP PVKPPPVHKP 360
  361 PTPIYSPPVK PPPVHKPPTP IYSPPVKPPP IQKPPTPTYS PPIKPPPLQK PPTPTYSPPI 420
  421 KLPPVKPPTP IYSPPVKPPP VHKPPTPIYS PPVKPPPVHK PPTPTYSPPI KPPPVKPPTP 480
  481 TYSPPVQPPP VQKPPTPTYS PPVKPPPIQK PPTPTYSPPI KPPPVKPPTP TYSPPIKPPP 540
  541 VHKPPTPTYS PPIKPPPIHK PPTPTYSPPI KPPPVHKPPT PTYSPPIKPP PVHKPPTPTY 600
  601 SPPIKPPPVH KPPTPTYSPP IKPPPVHKPP TPTYSPPIKP PPVHKPPTPT YSPPIKPPPV 660
  661 QKPPTPTYSP PVKPPPVQLP PTPTYSPPVK PPPVQVPPTP TYSPPVKPPP VQVPPTPTYS 720
  721 PPIKPPPVQV PPTPTTPSPP QGGYGTPPPY AYLSHPIDIR N

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..61] deduced N/A No confident structure predictions are available.
    2 View Details [62..312] deduced N/A No confident structure predictions are available.
    3 View Details [313..395] deduced N/A No confident structure predictions are available.
    4 View Details [396..565] MSA 2.164993 View MSA. No confident structure predictions are available.
    5 View Details [566..761] FFAS03 1.04 THE BLUETONGUE VIRUS (BTV) CORE BINDS DSRNA


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle