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Protein Overview: gi|25518789, gi|...

General Information:
Name(s) found: gi|25518789 [NCBI NR]
gi|15217593 [NCBI NR]
gi|10998942 [NCBI NR]
Description(s) found:
Found 11 descriptions.
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  • pir||H86459 hypothetical protein T1E4.2 - Arabidopsis thaliana [NCBI NR]
  • gi|15217593|ref|NP_174624.1| leucine-rich repeat family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|10998942|gb|AAG26081.1|AC069299_7 hypothetical protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 478 amino acids

    Gene Ontology:
    Cellular Component: cell wall [IDA]
    membrane [IDA]
    plant-type cell wall [IDA]
    Biological Process: signal transduction [IC]
    Molecular Function: protein binding [ISS][NAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSCCFPLFI FAFVIFLRCL SPIEAATCHP DDEAGLLAFK SGITQDPTGI LSSWKKGTDC  60
   61 CSWKGVGCLT NRVTGLTING QSDVTGSFLS GTISPSLAKL QHLVGIYFTN LRNITGSFPQ 120
  121 FLFQLPNVKQ VYFTNSRLSG PLPANIGALS ELGELSLDGN LFTGPIPSSI SNLTRLYLLN 180
  181 LGDNLLTGTI PLGLANLKIL LSLNFGNNRL SETIPDIFKS MQKLQSLTLS RNKFSGNLPP 240
  241 SIASLKPILN YLDLSQNNLS GTIPTFLSNF KVLDSLDLSR NRFSGVVPKS LANMPKLFHL 300
  301 NLSHNFLTGP LPAMKNVDGL ATLDLSYNQF HLKTIPKWVT SSPSMYSLKL VKCGINMSLD 360
  361 NWKPVRPNIY FYIDLSENEI SGSLTWFFNL AHNLYEFQAS GNKLRFDMGK LNLSERLESL 420
  421 DLSRNLIFGK VPMTVAKLQK LNLSHNHLCG KLPVTKFPAS AFVGNDCLCG SPLSPCKI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..132] FFAS03 2.16 Polygalacturonase inhibiting protein PGIP
    2 View Details [133..478] PSI-BLAST 32.0 No description for 2omuA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle